Empedobacter stercoris: HNV03_07370
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Entry
HNV03_07370 CDS
T06804
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
este
Empedobacter stercoris
Pathway
este00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HNV03_07370 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
este01007
]
HNV03_07370 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
este03016
]
HNV03_07370 (lysS)
Enzymes [BR:
este01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HNV03_07370 (lysS)
Amino acid related enzymes [BR:
este01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HNV03_07370 (lysS)
Transfer RNA biogenesis [BR:
este03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HNV03_07370 (lysS)
Prokaryotic type
Other AARSs
HNV03_07370 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
Motif
Other DBs
NCBI-ProteinID:
QNT14501
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All DBs
Position
1532503..1534206
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AA seq
567 aa
AA seq
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MQLSEQEIIRREKLQQLRDLGVEPYPAEEFVVTSNSKEIKEKYEEGKVVKLAGRLMSVRV
MGKASFAELQDSEGRIQLYVSRDDISSSEEGIEYNTIFKKLMDIGDFIGIEGYEFKTKVG
EISVHVTKLTLLSKTLRPLPIVKTDDEGHIFDAFTDPELRYRMRYVDMVVNPHVKEIFLK
RTRLFNAMRNFFNDRGYMEVETPILQSIPGGAAARPFITHHNALDIPLYLRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTEQLLEHCAIAVN
GTSEATFGEHKINFKAPYKRVTMRQAIIDFTGFDIDGKSEAELFEAAKSMGIEVDDTMGK
GKLIDEIFGEKCEGNYIQPTFITDYPKEMSPLTKQHRDNPELTERFELMVCGKEIANSYS
ELNDPIDQRERFEEQLKLSAKGDDEAGEFIDEDFLRALEFGMPPTGGLGIGMDRLIMFLT
NNPSIQEVLFFPQMRPEKAAPAYELTKEETKIIEILKANENIDLNELKSQAALSGKKWDK
SMKNLAKYNLTKVTVDGDAKTVAYLAE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtctgaacaagaaattattcgtagagaaaaactacaacaattaagagactta
ggcgttgagccttaccctgccgaagaattcgtggtaacttctaattcgaaagaaattaag
gaaaagtacgaagaaggaaaggtagtcaagcttgccggacgattgatgagtgttcgtgta
atgggaaaagcatctttcgcagaattacaagatagcgaaggtcgtattcagctgtatgta
tcaagagatgacatctcttcatcagaagaaggaatcgaatacaatactattttcaagaag
ttgatggatataggagatttcattggaatcgaaggatacgaattcaaaactaaagtgggt
gaaatttctgttcacgtaacaaaattaacattgttatcaaaaactttacgtccattacca
atcgttaaaacagacgatgaaggtcacatttttgatgcttttacagatccagaattacgt
taccgtatgcgttacgtggatatggttgttaatccccacgtgaaagaaattttcttgaaa
cgtacgcgtttattcaacgctatgcgcaatttcttcaacgatcgtggatacatggaagta
gaaactcctatcttacaatcaattccaggaggtgctgctgctcgtccatttattacgcat
cacaatgctttggacattccattatatttaagaatcgcaaacgaattatacttaaaaaga
ttaatcgttggtggtttcgatggtgtttacgaattttctaaaaacttccgtaacgaagga
atggaccgtacacacaatccagaatttacagcaatggaaatttacgttgcatacaaagat
tacaactggatgatggatttcacagagcaattattagagcactgtgctatcgctgtcaat
ggaacttctgaagctacttttggagaacataaaatcaattttaaagcgccttacaaacgc
gtaacaatgcgtcaagcaataattgattttacaggttttgacatcgatggtaaatctgaa
gctgaattatttgaagcagccaaaagtatgggaatcgaggttgatgatacaatgggtaaa
ggaaaactaattgatgaaattttcggtgaaaaatgtgaaggaaattacattcaaccaact
ttcattaccgattatccaaaagaaatgtcgccattgacaaaacaacaccgcgataatcct
gaattaactgaacgtttcgaattaatggtttgtggaaaagaaattgcaaactcatattca
gaattaaatgatccaatcgatcaacgtgaacgtttcgaagaacaattaaaattatctgca
aaaggtgacgacgaagcaggagaatttattgacgaagatttcttacgtgctttagaattc
ggaatgccgcctacaggtggtttaggaatcggtatggaccgtttgattatgttcttaaca
aataatccatctattcaagaagttttattcttccctcaaatgcgtccagaaaaagctgca
ccagcctacgaattgacaaaagaagaaactaaaattattgaaatcttaaaagctaacgaa
aacattgatttaaatgaattaaaatctcaagctgctttgagcggtaaaaaatgggacaaa
tcaatgaaaaatttagcaaaatataacttgactaaagtaactgtagatggcgatgccaaa
acggttgcatatttagccgagtaa
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