Empedobacter stercoris: HNV03_07715
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Entry
HNV03_07715 CDS
T06804
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_07715 (sbcD)
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNV03_07715 (sbcD)
Archaeal homologous recombinant proteins
HNV03_07715 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
YqgU
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
QNT15665
LinkDB
All DBs
Position
complement(1608035..1609240)
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AA seq
401 aa
AA seq
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MRILHTADWHLGKKLDSFSRLEEQILVMNEIVEIAEQEQVDLVLIAGDLFDNFNPSVEAV
ELFYKTLKRLSNNGIRPVVAISGNHDSPNLIDAPDPLARECGIILIGHPNAKVQEFELND
FKISKSVEGMIELKLNNHDFPIRILHTPYANEIRLKQYLGENKEDALNEILAINWKTIAD
NHCDKNGVNLLMAHLYMNQKGAEILEEPEGEKPIKIGNADMIFSEAIPPQIQYTALGHLH
GFKNIGTEEKPVIYSSSPLCYSFSEAGQTKYVSIIEAQPNENVSYHQIKLKNGKPLIRKT
FDEVNNAVEWLNNHQNALVELTLESDTFLKAEDRKLIYQSHSGIIHLIPKVKNQAIETVE
YKFADQTKDIKELFVDYFKSKNGNQEPNDEMKDLFNEILNS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagaattctacatacagccgattggcatttgggtaaaaaattagatagtttttcacgt
ttagaagaacaaattttagtgatgaatgagattgtcgaaattgcagagcaagaacaggta
gatcttgtcttaattgcaggtgatttattcgataattttaatccaagtgtagaagctgta
gaattattttataaaacattaaaacgactttcgaataatggaatacgtcctgttgtagcg
atttctggaaatcacgattcgccaaatttaatagatgctccagatcctttggcacgcgaa
tgtggaattattttgataggtcatcccaacgcgaaagttcaggaatttgaactaaatgat
tttaaaatttctaaatctgtcgaaggaatgattgaattgaaattaaataatcatgatttt
cctattcgaattttacatacaccttatgcgaatgaaattcgtctgaaacaatatttgggt
gaaaacaaagaagatgcattaaatgaaattttagcaattaattggaaaacgattgcagac
aatcattgcgataaaaatggagtcaatttattgatggcgcatttgtatatgaaccaaaaa
ggtgctgaaattttagaagaaccagaaggtgaaaaaccaattaaaattggtaatgctgat
atgattttttctgaagcaattccacctcaaattcaatacacagctttaggacatttgcat
ggtttcaaaaatatcgggacagaagaaaaacctgtcatttacagttcttcgccattgtgt
tatagtttttcggaagctggacaaacgaaatatgtctcgattatcgaagcgcaaccaaat
gaaaatgtttcgtatcatcaaattaaattaaaaaacggaaaaccgcttattcgtaaaacg
tttgatgaggtaaataatgcggtagaatggttaaacaatcatcaaaatgcgttggtagaa
ttaaccttagaaagtgatacgtttctgaaagcagaagaccgaaaattgatttatcaatcc
catagtggaattattcatttgattccaaaagtgaaaaatcaagccatagaaacggttgaa
tataaatttgcagatcaaacaaaagatataaaagaattgtttgttgattattttaaatcg
aagaatggcaaccaagaaccaaacgacgaaatgaaagacttgtttaatgaaattttgaat
agttaa
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