Empedobacter stercoris: HNV03_08270
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Entry
HNV03_08270 CDS
T06804
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
este
Empedobacter stercoris
Pathway
este03030
DNA replication
este03430
Mismatch repair
este03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNV03_08270
03430 Mismatch repair
HNV03_08270
03440 Homologous recombination
HNV03_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
este03032
]
HNV03_08270
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_08270
Enzymes [BR:
este01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNV03_08270
DNA replication proteins [BR:
este03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNV03_08270
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNV03_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
Rv2179c-like
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
QNT14653
LinkDB
All DBs
Position
complement(1709543..1710910)
Genome browser
AA seq
455 aa
AA seq
DB search
MYAILDIEATGGKVGEESIIEIAVYKYDGKEIVDQFISLVNPEKKIDKFVQKLTQITDKM
VLTAPKFHEVAKRIVEITDDCILVGHNVMFDYRMLKQEFERLGYNYEKEWIDTFEYSEKL
IPNLPSYSLGKLCQSLGIVVTDRHRASGDARATITLFKMLLDKDSEKIITKKTGLKQPKK
ASSKYQKLLENLPNTIGVFYMYNSRKQLIYISRSNNIARSINQIFTSKTLKANKLKRYTR
SIKFEETGSGFLAAIKENNEVLTNQPMYNLKLVGNKVYPYGLYYLESKRGYSRLEIGKVR
KVEPVLKFKTKERAKEVLEKIVNDYNLCQQVNEGIKSDESCFQYKVNKCNGACIKEESRD
DYNKRIKDFIQTTEYPSDTFLIIDKGRSGIEKSFYLIENKEFKGYGYYEYHHQIKSLEKI
HNILILIQETDEIKNMLKYFLYKVSSNPSQIVILN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgcgattttagatatagaggcgactggcggaaaagtaggagaagagtcaatcatt
gagattgctgtgtataaatatgatggaaaagaaattgttgatcaatttatttcattagtt
aatcccgaaaaaaagattgacaaatttgtacaaaaattaactcaaattaccgataaaatg
gtgttaactgcaccaaagtttcatgaagtagctaagaggatagttgaaattacagatgat
tgtattttagttggacataatgtgatgtttgattatagaatgttgaaacaggagtttgaa
cgattaggctataattatgaaaaagaatggattgatacttttgaatacagtgagaaatta
atcccaaatttaccatcatattctttgggtaaattgtgtcaatccttaggtattgtggta
acagatcgccatcgcgcttctggagatgcaagagcaacgataacgttattcaaaatgctt
ttagataaagattctgaaaaaattatcacaaagaaaacaggtttaaaacaacctaaaaaa
gcaagttctaaatatcagaaattgttagaaaatctaccgaatacgataggtgttttttac
atgtacaatagtagaaaacagttaatttatattagtagaagtaataatatcgcacgatct
atcaatcaaatttttacatcaaaaaccttaaaagcaaataaattaaaacgttatactcgc
tcgattaaatttgaagaaactggaagcggatttttagccgctataaaagagaataatgag
gttttgactaaccaaccaatgtataatcttaaactagttggaaataaagtatatccgtat
gggttgtattatttagaatcgaaaagaggttattcacgtttagaaataggaaaagttaga
aaagtagagcctgttttaaaatttaagacgaaagaacgtgccaaagaggttttagaaaaa
attgttaatgattacaatctttgtcaacaagtaaatgagggaataaaatctgatgaatct
tgttttcagtacaaagtgaataaatgtaatggagcttgtataaaggaggaatctcgagat
gattacaataaaagaatcaaggattttattcaaacgacagagtatccttcggatacattt
ttaatcattgataaaggtcgaagtgggatagagaagtcattttatttaatcgaaaataag
gaatttaaaggatatggctattacgagtatcatcatcagataaaatcgcttgaaaagata
cataacatattgattctaattcaagaaacagatgaaatcaagaatatgctaaaatatttt
ctgtacaaggtttcgtctaatccaagccaaattgtaatattaaattaa
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