Empedobacter stercoris: HNV03_08780
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Entry
HNV03_08780 CDS
T06804
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
este03032
]
HNV03_08780 (gyrA)
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_08780 (gyrA)
Enzymes [BR:
este01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HNV03_08780 (gyrA)
DNA replication proteins [BR:
este03032
]
Prokaryotic type
DNA Topoisomerases
HNV03_08780 (gyrA)
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HNV03_08780 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Gp49
DUF5748
Fer2_4
DUF835
Motif
Other DBs
NCBI-ProteinID:
QNT14748
LinkDB
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Position
1809124..1811697
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AA seq
857 aa
AA seq
DB search
MTEGERLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMYELGVFSNR
SYKKSARIVGEVLGKFHPHGDSSVYDTMVRMAQPWSLRYLLVDGQGNYGSVDGDPPAAMR
YTEARLQKISDELLADLDKETVDFQLNFDDTIQEPTVLPTRVPNLLVNGASGIAVGMATN
MAPHNLTEVIDGTIAYIDNREITIDELTQYIKAPDFPTGGTIYGYDGVKQAFETGRGRVV
LRAKTNFEEVHGRDCIIVTEIPYQVNKADMIAKTAELVKDGKLDGISEIRDESDRKGMRI
VYVLKMDAVPNVVLNKLFKYTQLQSSFSVNNIALVNGRPEQLNLKDMIYHFVEHRHEVVI
RRTEYELRKAQERAHILEGYMKVIGTQDDLDRAIKIIRESATPEDARTGLMEAFELSEIQ
ARAILDLRLRTLTGLEIDKIREEYEEIMKMINHLKDILANKDLRMQIIKDELLEVRKKYG
DERRTEIDYAGGDLNIEDLIPDEQVVLTISHMGYIKRTPLSEYRKQSRGGVGNRAATTRD
EDFLEYMVSASNHQYMLFFTEKGKCFWMRVYEIPEGSKTSKGRAIQNLINIEPDDKVKAY
ILTHDLMNEEYVNNNYVIMVTKNGIIKKTSLEAYSRPRANGINAITVREGDTLLEALLTN
GKSQIMIASKYGKAIRFEDEKVRPMGRTASGVRGINLGDQPDNEVVGMIVVTDIEKETVL
VVSEQGYGKRSSIEDYRETNRGGKGVTTLNITDKTGKLIAIEAVTDEDDLMIINKSGVAI
RTGLDEIRVMGRATQGVRLINLKKNDEIAAIAKVQVEEELENEVEHDEEGNPIIVENTNE
NNETQANETPAEDPNNE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaggagaaagactaatcccaattaacattgaggatgaaatgaaatccgcttac
atcgattattcgatgtcggtaatcgtatctcgtgcgcttccggatgtgcgtgatggttta
aaacctgtacaccgtagagtattattcggaatgtatgaattaggtgttttttctaatcgt
tcttacaaaaagtcggcacgtattgtaggggaagttttaggtaaatttcacccacatggc
gacagttctgtttacgacactatggtacgtatggcacaaccttggtctttgcgttactta
ctagttgacggacaaggtaactacggttctgtagatggagatccacccgctgcaatgcgt
tatactgaagcaagacttcaaaaaatatcagacgaattattagctgatttagataaagaa
acagttgattttcaactaaacttcgacgatacaatccaagaacctacggttttaccaaca
cgtgttcctaacctattagtgaatggtgcatctggtattgcagttggtatggctacaaat
atggctccgcacaacttaacagaagttattgacggaactatcgcttatattgataatcgt
gaaattacaattgacgaattaacacaatatatcaaagcaccagacttcccaactggaggt
actatttatggttacgacggagtaaaacaagccttcgaaactggacgtggacgtgttgtt
ttacgtgcaaaaactaatttcgaagaagtacatgggcgcgattgtattatcgtaacagaa
attccttaccaagttaacaaagcagacatgattgcaaaaactgctgagttggtaaaagac
ggtaaattagatggtatttctgagattcgtgacgaatctgaccgtaaaggtatgcgtatc
gtttatgtcttaaaaatggacgcagttcctaacgtagttttaaataaattatttaaatat
actcaattacaatcttctttcagtgtaaacaacattgccttggtaaatggtagaccagag
caattgaacttgaaagatatgatttatcatttcgtagaacaccgtcacgaagttgttatt
cgtcgtactgaatacgaattgagaaaagcacaagaaagagcgcacatcttagaaggttac
atgaaagtaatcggaacacaagatgatttggaccgtgcaattaaaattattcgtgaatct
gcaacaccagaggatgctcgtacaggattaatggaagcttttgagttatcagaaattcag
gcacgtgccatcttagatttacgtttacgtacattaactggtcttgagattgataagatt
cgtgaagagtacgaagaaatcatgaaaatgattaatcacttaaaagatattttagcaaac
aaagatttacgaatgcaaattatcaaagacgaattattagaagttcgtaaaaaatatggt
gatgaacgtcgtacagagatcgattatgcaggtggtgatttaaatatagaagatttaatt
cctgatgaacaagttgttttaacaatttctcacatgggttatatcaaacgtacaccactt
tcagaataccgcaaacaatctcgcggaggagttggtaacagagctgctacaactcgtgac
gaagatttcttagaatatatggtttcagcatctaatcaccaatacatgttattctttaca
gaaaaaggtaaatgtttttggatgcgtgtatatgaaattccagaaggttctaaaacatct
aaaggtagagctatacaaaacttaatcaacatcgaaccagatgacaaagtaaaagcttat
atcttaacacacgatttaatgaacgaagaatacgtaaataataattacgtaattatggta
actaaaaatggtatcatcaagaaaacatctttagaagcttattctcgtccacgtgcaaat
ggtattaacgcaattacagttcgtgaaggtgatacattattagaagcattattaacaaat
ggtaaatcccaaattatgatcgcttctaaatatggtaaagcaattcgtttcgaagatgaa
aaagttcgtccaatgggtcgtactgcttcaggtgttcgtggaattaacttaggtgatcaa
cctgataatgaagttgtcggaatgattgttgtaactgatatagaaaaagagactgtatta
gtcgtttctgaacaaggttatggaaaacgctcatctatagaagattaccgtgaaacaaat
cgtggtggaaaaggtgtcacaactttaaatatcactgacaaaacaggtaaattaatcgca
attgaagcggttacagatgaagatgatttaatgattatcaataaatctggagttgcaatt
agaacaggtttagatgaaattcgtgtaatgggtcgcgcaacgcaaggtgttcgattgatt
aacctgaaaaagaacgatgaaattgcagctattgcaaaagtgcaagttgaagaagaattg
gaaaacgaagtggaacatgatgaagaaggaaatccaattattgtagaaaatacaaacgaa
aacaacgaaactcaagcaaatgaaacacctgctgaggatccaaataatgaataa
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