Empedobacter stercoris: HNV03_09510
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Entry
HNV03_09510 CDS
T06804
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
este
Empedobacter stercoris
Pathway
este00541
Biosynthesis of various nucleotide sugars
este01100
Metabolic pathways
este01250
Biosynthesis of nucleotide sugars
Module
este_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
este00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HNV03_09510 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
este01005
]
HNV03_09510 (kdsB)
Enzymes [BR:
este01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HNV03_09510 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
este01005
]
Lipid A
HNV03_09510 (kdsB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
IspD
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
QNT14879
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Position
complement(1961722..1962465)
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AA seq
247 aa
AA seq
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MKKIAVIPARYAASRFPGKLMQLLGNKTVIRMTYENVVATNLFDDVFVVTDSKLIFEEIV
NHGGKAIMSIKEHETGSDRIAEAIENIECDIILNVQGDEPFVNEKALADILSSFDGEIGK
TVDVATLKESISEEEEINNPNFVKVVTDINNFALYFSRSAIPFARESNFTPNYFRHLGIY
AFRKNALLNFSKLAMRQNEKAEKLEQLRYLEYGMKIKVIETESIGVGIDTPEDLERAKEY
LSIIVKK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaatagccgttattccagcacgatatgcagcttctcgttttcctgggaaattg
atgcaactattgggtaataaaactgtcattcgaatgacttacgaaaatgttgtggcaacc
aatttgtttgatgatgtttttgtggtgacagattctaagttgatttttgaagaaatagta
aaccacggaggaaaagcaattatgagtataaaagaacatgaaactggaagtgatcgaatt
gctgaagcgatcgaaaatatagaatgtgatattattttgaatgttcagggtgacgaacca
tttgttaatgaaaaagccttggctgatattctttcttcttttgatggagaaataggaaaa
actgtagatgtagcgacattaaaagagtcaatctcggaagaagaagaaatcaataatcca
aactttgtaaaagtggtaacggatatcaataattttgcactttatttctctcgctcagcg
attccatttgctcgcgaatccaattttacaccaaattattttcgtcatttaggaatatat
gcgtttagaaagaatgccttattgaatttttctaaattagcaatgcgtcaaaatgaaaaa
gcagaaaaattggaacaattgcgttacttagaatatgggatgaaaatcaaagtaatcgaa
acagaatcaattggagttggaattgatacacctgaagatttagaacgtgcaaaagaatat
ttatccattattgttaaaaaataa
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