Empedobacter stercoris: HNV03_09590
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Entry
HNV03_09590 CDS
T06804
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
este02000
]
HNV03_09590
Transporters [BR:
este02000
]
Other transporters
Pores ion channels [TC:
1
]
HNV03_09590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
OMP_b-brl
DUF5137
Motif
Other DBs
NCBI-ProteinID:
QNT14893
LinkDB
All DBs
Position
complement(1981272..1982771)
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AA seq
499 aa
AA seq
DB search
MKKFNLLLSAVALFVAGNSFVDAQNSKNPWALTVGAHAVDHNSVTGPFNQYFKTDNWDIV
PPLSKLSIIRNLNRSFDVDLTASVGEVDNNRLRVKDELFINAGLGLRYKLANGYILKEDS
WFDPYVRVGAGYHRYDYTGLQFPLTAYYGNENGGTYQITEAEDLEKNHFVASLGAGVNFW
FTKNFGLNVASDYNWLPAYGGNNYFDFFQHTVGVTFRFGKQDRDNDGIPDDEDACPDTPG
IATGDPATNGCPDTDGDGVFDKDDACPEEFGLAEFNGCPDTDGDGVPDKDDACPEVAGPV
ENNGCPWPDTDGDGILDKDDACPNEAGLAEFQGCPDTDGDGIPDKDDACPTEKGPKENNG
CPWTEVHVAKRLSNILFEYNSDKIVPSSYDDVQVAAQILNSDDLKTKSFYLDGHADQRGS
AAYNKTLSLKRAKALVKILSERGGVDANRLTARGLGESQLLCTEETEECYQRNRRVEVLP
KNATVTETKVVKPATKKKK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttaatctattattatctgcagtagcattattcgtagcgggtaattctttt
gtagatgctcaaaattctaagaatccttgggctcttacagttggtgctcacgcagttgac
cacaactcggtaactggaccattcaaccagtatttcaaaacagataactgggatatcgtt
cctcctttatctaaattgtctattattcgtaacttaaacagatcttttgacgttgattta
actgcttctgtaggtgaagttgacaacaacagattacgtgttaaagatgaattattcatc
aatgcaggtttaggtttacgttataaattagctaatggctatatcttaaaagaagattct
tggtttgatccatacgtacgtgtaggtgctggataccacagatatgattacacagggtta
caattcccattaactgcatactatggtaatgagaatggaggtacttaccaaattactgaa
gctgaagacttagaaaaaaatcatttcgtagcatctttaggagcaggggttaacttttgg
tttactaaaaactttggtttaaacgttgcttctgactacaattggttaccagcttacgga
ggaaacaactattttgacttcttccaacatacagtaggagttactttccgtttcggaaaa
caagatagagataatgatggtattccagatgatgaggatgcatgtccagatactccgggt
attgctacaggtgatcctgcaacaaacggatgtcctgatacagacggtgacggagtattt
gataaagatgatgcgtgtccagaagaatttggtttagctgagtttaacggatgtcctgat
acagatggtgatggtgttccagataaagatgatgcttgtccagaagttgctggtccagta
gaaaacaacggatgtccatggcctgatacagatggtgacggaatcttagataaagacgat
gcttgtccaaacgaggctggtttagctgagttccaaggttgtcctgatactgacggagat
ggtattccagataaagatgacgcttgtccaactgaaaaaggaccaaaagaaaataacgga
tgtccttggacagaagttcacgtagctaaacgtttatctaacattttattcgaatacaac
tctgataaaatcgttccatcttcttatgatgatgtacaagttgctgctcaaattttaaac
tctgatgatttaaaaactaaaagcttctacttagatggacatgctgaccaaagaggttct
gcggcttacaacaaaactttatctttaaaacgtgctaaagcattagttaagattttatct
gaaagaggtggagttgacgctaaccgtttaactgctcgtggattaggagagtctcaatta
ttatgtactgaggaaacagaagaatgttaccaaagaaacagacgcgttgaagttttacct
aaaaacgctacagttactgaaactaaagttgtaaaaccagctacaaaaaagaaaaaataa
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