Empedobacter stercoris: HNV03_09685
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Entry
HNV03_09685 CDS
T06804
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
este
Empedobacter stercoris
Pathway
este03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNV03_09685 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
este03019
]
HNV03_09685 (recQ)
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_09685 (recQ)
Enzymes [BR:
este01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNV03_09685 (recQ)
Messenger RNA biogenesis [BR:
este03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNV03_09685 (recQ)
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNV03_09685 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Peptidase_C36
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QNT14912
LinkDB
All DBs
Position
2000885..2003086
Genome browser
AA seq
733 aa
AA seq
DB search
MEATSKNLTSYLKKYFGFDQFKGQQHEIITSLLNKEDVFVLMPTGGGKSLCYQLPALMSD
GVAIIVSPLIALMKNQVDAIRGISENDGIAHVLNSSLNKSETKTVMTDIKNGVTKMLYVA
PESLTKEEYIDFFKSVQISFFAIDEAHCISEWGHDFRPEYRNLKSIINKIGDAPIIALTA
TATPKVQEDIQKTLGMQSAKVFKDSFNRTNLFYEIRPKVDQDKQIIKFIKQNDGKSGVIY
CLSRKKVEEITQLLQVNGINAIPYHAGLDAKTRSKHQDMFLMEDASVVVATIAFGMGIDK
PDVRFVMHYDMPKSLESYYQETGRAGRDGGEGICIAFYDYKDIEKLEKFLASKPVAEREV
GMQLLSEVVAYAETSMSRRKFLLHYFGENFDDKNGEGANMDDNMRNPKKMTEAKEDAIIA
LDVVQKTNQKLKLNDVVNVIVGKETSITKSYNLSSEDFFGIGKSKEDYYWKSILRQLIVR
NLLEKEIESYGILKITKAGKDFISKPTSFEIAEDIDFKKLLSEGSFDKEETSSTPIAFDD
VLLKQLKDLRKKISKKHQIPPFAVFQDSSLDDMTMQYPTTVKELTNVFGVGEGKAQKFGK
EFVDFIAQYVKDNDIIRPEDMVIKQVADKSSHKVYIIQSTDRKLNLEDVAEAKNMTMSDL
LSEMESIVYQGTKLNINYYIDEVLDEDQQEEIYEFLMDADTDSMSSLLDEFGDDYDEEEL
RLMRIKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaagccacttcgaaaaacttaacatcttacctaaaaaaatattttggtttcgaccaa
tttaaaggacagcagcacgaaatcattacaagcttactaaataaagaagatgtatttgtt
ttgatgccaactggcggaggtaagtctttatgttatcaactaccggcattaatgtcagat
ggagtcgcgattattgtttcacctttaatcgccttaatgaagaatcaagtagacgcaata
cgaggaatttctgaaaatgatggaattgcgcacgtattaaactcttctttgaataagtca
gaaacaaaaactgtgatgacggatatcaaaaatggagtaacaaaaatgttatatgttgca
cccgaatctttgacaaaagaagaatacatcgatttttttaaatcggttcaaatttctttt
tttgctattgatgaagcgcactgtatttctgaatggggacacgattttcgaccagaatat
cgtaacctaaaatctattatcaacaaaattggtgatgcgccaattattgcgttgactgca
acagcaacacctaaagtacaagaagatattcagaaaactttgggaatgcaaagtgcaaaa
gtatttaaagattcttttaatcgtacgaatttattttacgagatccgtccaaaagttgat
caggacaaacaaattatcaaatttatcaaacaaaacgatggtaaatctggtgtcatttat
tgtttaagtcgtaaaaaggttgaagaaattactcaacttttacaagtaaacgggatcaat
gcaattccttaccacgctggtttggatgcaaaaacacgtagcaaacaccaagatatgttc
ttgatggaagatgcaagtgttgttgttgcaacaatagcttttggaatgggaatcgataaa
cctgacgtacgttttgtgatgcattatgatatgccaaaatcgttagaaagttattaccaa
gaaactggtcgtgctggtcgcgatggcggtgaaggtatatgtattgctttctacgattat
aaagatatcgaaaaactggagaaattcttagcgagcaaacctgttgctgaacgagaagtt
ggaatgcagttactttctgaagtggttgcctatgccgaaacttcgatgtctcgtcgtaaa
tttttgttgcattattttggtgaaaattttgacgataaaaatggtgaaggcgcaaatatg
gacgacaacatgcgcaatccgaagaaaatgacagaagcaaaagaagatgcaataatcgca
ttagatgttgttcagaaaacaaatcaaaaattaaaattaaatgatgttgtaaatgttatc
gttggtaaagaaacttcgattacaaaatcatataatttaagctccgaagatttctttgga
attggaaaatcgaaagaagattattattggaaatctattttacgccaattaattgttcgt
aatttattagagaaagaaatcgaatcgtatggtattttaaaaattaccaaagcaggaaaa
gatttcattagtaaaccaacttcttttgaaattgccgaagatattgatttcaaaaaattg
ttatcagaaggtagctttgataaagaagaaacgtcttctactcctattgcttttgatgat
gttttattgaaacaattgaaagatttacgtaaaaaaatctcaaaaaaacatcagattcca
ccttttgctgttttccaagattcaagtttagatgatatgacaatgcaatacccaacaaca
gttaaggagttaacaaatgtgtttggagttggagaaggaaaagctcaaaaatttgggaaa
gaatttgtagattttattgcgcaatatgtaaaagacaatgatatcattcgtcctgaagat
atggtgattaaacaagttgcggacaaatcgagccacaaagtttatatcattcaatcaaca
gatagaaagttaaatcttgaagatgttgcggaagcaaaaaatatgacgatgagcgatttg
ctttcagaaatggaaagtatcgtttatcaaggaacaaaattaaatatcaattattacatt
gacgaagttttggacgaagaccaacaagaggaaatttatgaattcttgatggatgcagat
accgactcaatgtcatcattgttagatgaatttggtgacgattatgatgaagaagaatta
cgtttgatgcgtatcaaattcatcagtgaagtcgcaaattaa
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