Empedobacter stercoris: HNV03_09730
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Entry
HNV03_09730 CDS
T06804
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
este
Empedobacter stercoris
Pathway
este03030
DNA replication
este03410
Base excision repair
este03420
Nucleotide excision repair
este03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNV03_09730 (polA)
03410 Base excision repair
HNV03_09730 (polA)
03420 Nucleotide excision repair
HNV03_09730 (polA)
03440 Homologous recombination
HNV03_09730 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
este03032
]
HNV03_09730 (polA)
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_09730 (polA)
Enzymes [BR:
este01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNV03_09730 (polA)
DNA replication proteins [BR:
este03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HNV03_09730 (polA)
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HNV03_09730 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HNV03_09730 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DUF2203
Motif
Other DBs
NCBI-ProteinID:
QNT14921
LinkDB
All DBs
Position
complement(2010972..2013803)
Genome browser
AA seq
943 aa
AA seq
DB search
MNQLDKRLFLLDAYALIFRGYYAFIKNPRINSKGFNTSAIMGFTNSLFDVIRREQPTHLA
VVFDVGEATVRTVDYADYKANRDETPEAIRDAVPYIQEILKALCIPVLYAQGYEADDVIG
TLAQKAEKEGFTTYMVTPDKDFAQLVTDKIKMYRPAANGKGVEIWGIEEVKEKFDIDSPS
QVIDYLGMMGDAVDNIPGLPGVGAKTASKYLKEFGSMENLLANTDKLKGKAKEKIEENKE
LGILSKKLATILTDAPIEFDEEDLTVCPPDIEKITELFTELEFRRMLETVYRIYGLDTSG
IIKEAQEEISFASQENSNQSAQQSLFDFTSDEEIVPQNSAFTDISTTNHLYQLIDTKKGR
EILLRNILKQKEVTFDTETTSLDALEAELVGISFSWEKGKGYYIPFSTDFEETKTIINEF
KPFFEDETISKIGQNLKYDIKVLDKYDIVVNGQNFDTMIAHYLINPDMRHNMDVLSETYL
SYQPVSIESLIGKKGKNQKNFRDVPLMEQTEYGVEDSDITNQLKNLFEPELIKANTHKLF
TDLEMPLMQVLADMELEGVNLDVPFLKELSVKHEAKLRELETKIHQDAGEEFNLNSPKQL
GEILFDKLKLDPKAKKTKTGQYATGEEILSKLKDKHPIIKDILEYRQLQKLKSTYIDALP
ELVNPKTGRVHTTYAQTVAATGRLSSVNPNLQNIPIRSEEGQQIRKAFVARDENHVIISA
DYSQIELRLIAQMSKDPAMVEAFKQGEDIHASTAAKVFNVALDEVTREQRSQAKTVNFGI
IYGVSAFGLAEQANISRKEAKFLIDAYYETYPTLKAYIEKQVEVARDQGFVETLMGRRRY
LKDINSRNAVVRSHAERNAVNAPIQGTAADIVKMAMIQIQKELKKNYQTKMILQVHDELI
FDVPKDEIDKVSELIKSTMEAAMQMDVPLIAEVGVGANWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattagataaaagactttttttgttagatgcctatgccttaatttttagaggt
tattacgcatttatcaaaaatccacgaatcaattccaaaggtttcaatacatcagcaatt
atgggatttaccaattcattgttcgatgttattcgtcgtgagcaaccaacacatttagcc
gttgtttttgatgtaggtgaagcaactgtacgtacggtagattatgcagattataaagca
aatcgtgatgaaacacccgaagcgattagagatgcggtaccttatattcaagaaatatta
aaggcactttgtattcctgttttatatgcgcaaggttacgaagcagatgatgtaattggg
acgttagcacagaaagccgagaaagaaggttttacaacttatatggtaacgcctgataag
gattttgcacaattggttacagataagattaaaatgtaccgacctgcagcaaacggtaaa
ggagttgagatttggggaatagaagaagtcaaagaaaaatttgatattgatagcccaagt
caagtgattgattatcttggaatgatgggtgatgctgttgataatattccaggtttacca
ggtgtaggagctaaaacagcaagtaaatatttgaaagaatttggatcgatggaaaatctt
ttagcgaatacagataagctaaaagggaaagccaaagaaaaaattgaagaaaataaagaa
cttggaattctttccaaaaaattagcgacaattttgacggatgcaccaattgaatttgat
gaagaagatttaaccgtttgtccgccagatatagaaaaaataactgaactttttacagag
ttagaattccgtagaatgttagaaacagtctatagaatttatggattggatacatctgga
ataatcaaggaagcacaggaagaaatatcatttgcaagtcaagaaaactctaatcaatct
gcacaacaatccttatttgattttacttcggatgaagaaattgttcctcaaaattcagca
ttcacagatatttcaacaaccaatcatttgtatcaattgatcgatacaaaaaaaggtcgt
gaaattttgttgcgaaatattctgaaacaaaaagaagtgacattcgatacagaaacgact
tcactggatgcattggaagcagaattagtcggaatttcgttttcttgggaaaaaggaaaa
ggatattatatacctttttctactgattttgaagaaacaaaaacgattatcaatgaattt
aaacctttctttgaggacgaaactatttcgaaaattggtcaaaatttaaaatatgatatc
aaagttttagacaaatatgacattgttgtaaatggtcaaaattttgatacgatgattgca
cattatttgattaatccagatatgcgtcataacatggatgtgttgtcggaaacctatttg
agctatcaacctgtttcaatcgaaagcttgattggaaaaaaagggaaaaatcaaaagaat
tttcgtgatgttccgttgatggagcaaacagaatatggtgtagaagattcggatattacg
aatcaattgaaaaatcttttcgaaccagaattaatcaaagcgaatacacacaaattgttc
actgatcttgaaatgccgttgatgcaagttttggctgatatggaattggaaggtgtgaat
ttagatgttccatttttgaaagaactttctgtaaagcatgaagcgaaattaagagaatta
gaaacaaaaattcaccaagatgctggagaagagtttaatcttaattcgccaaaacaatta
ggagaaatcttgttcgataagttaaaattagatccaaaagcaaagaaaaccaaaactgga
caatatgcaactggagaagagatcttatcaaaactgaaagataaacatccaattattaag
gatattttagagtatcgtcaattacaaaaattaaaatcaacttatattgatgcgctgcca
gaattggtgaatccaaaaacgggtcgcgtgcatacaacgtatgcgcaaactgtggcagct
acaggacgtttgtcttctgtaaatccgaatttacaaaacattccgattcgttcggaagaa
ggacaacaaattcgtaaagcttttgtggcgagagatgaaaatcatgtgattatttctgcc
gattattctcagatcgaattgcgtttgattgcgcaaatgtcaaaagatcctgcaatggta
gaagctttcaaacaaggagaagatattcacgcatctacagcagcaaaagtatttaacgtc
gcattagatgaggttactcgtgaacaacgtagtcaagcgaaaactgtaaactttggaatt
atttatggtgtttcggcttttggtttggcagaacaagcgaatatttcgcgtaaagaagcg
aaatttttgattgatgcttattacgaaacttatccaacattgaaagcgtatatcgaaaaa
caagtggaggttgcgcgcgatcaaggttttgtagaaacattgatgggacgtcgtcgttat
ttgaaagatatcaactcaagaaatgctgtggtacgctcgcatgcagaaagaaatgctgtt
aatgcaccaatacagggaactgctgcggatattgtaaaaatggcgatgattcaaattcaa
aaagaattgaagaaaaattatcaaaccaaaatgattttacaagtgcatgatgagttaatt
tttgatgtacctaaagatgaaatcgataaagtttctgaattaattaaatcaacaatggaa
gctgcgatgcaaatggatgttccgttgattgccgaagttggtgttggtgccaattggtta
gaggctcattag
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