Empedobacter stercoris: HNV03_11585
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Entry
HNV03_11585 CDS
T06804
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
este03009
]
HNV03_11585
Enzymes [BR:
este01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HNV03_11585
Ribosome biogenesis [BR:
este03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HNV03_11585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QNT15240
LinkDB
All DBs
Position
complement(2409749..2410717)
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AA seq
322 aa
AA seq
DB search
MNNRRNQSNDRNSQGGNNRGKGGSARGNSSSRPSSGKGKPSFGGSKPSFGGKPTEEGKKS
FGPKKTFSKPGEKPFVKRLKKAPVDDGTIRLNKYVANAGIASRREADELIKTGIVTVNGQ
VITEMGYKVQPDDEVRFDGRKISSEKNVYFVLNKPKGFISTSNDEKGRKTVMDLMANATT
ARIFPVGRLDRQTTGVLLFTNDGYLTKKLTHPSHDIKKIYHVTLDKKLTANDMADIKKGV
RLIPEGIAVVDAISFIEGRPKNEVGIELHIGWNRVVRRIFQEKGYEVEALDRVSFAGLTK
KTIQRGEYRKLTELEVNFLKML
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagacgaaatcaatccaacgacagaaattcccaaggcgggaacaatcgtgga
aaaggtgggtcagcaagaggaaattcttcttcacgaccatcttcagggaaaggaaaaccg
tcttttggaggaagtaaaccaagttttggaggaaaaccaacagaagaaggaaagaaaagt
tttggaccaaaaaagacgttcagtaaaccaggtgaaaaaccttttgtaaaaaggttaaaa
aaagcaccagttgatgacgggactattcgtttaaataaatatgtagcgaatgcagggatt
gcatccagaagagaggctgacgagttgatcaaaactggaatcgttacagtgaatggtcaa
gtgattacagaaatggggtataaagtacaacccgatgatgaagtacgttttgatggtcgt
aaaatctcttcagagaaaaatgtctattttgtattgaataaacctaaagggtttatttct
acttcaaatgacgaaaaaggacgtaaaacagttatggacttaatggctaatgcaactaca
gcacgtattttccctgtaggtcgcttagacagacaaacaacaggtgttttattgtttacg
aacgatggttatttaacgaagaaattaacgcatccaagtcacgatattaagaaaatatat
catgtgacattggataagaaattaacagctaacgatatggctgacatcaaaaaaggtgta
cgcttaattcctgaaggaattgcagttgttgatgcgatttcttttatcgaaggtcgacca
aaaaatgaagttggtatagagctacacattggttggaaccgtgttgtacgccgtattttc
caagagaaagggtatgaggtagaggctttagatcgtgtttcttttgctggacttacaaag
aaaacaatacaaagaggtgaatatagaaaattaacagaattagaagttaacttcttgaaa
atgttataa
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