Empedobacter stercoris: HNV03_12365
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Entry
HNV03_12365 CDS
T06804
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
este02000
]
HNV03_12365
Transporters [BR:
este02000
]
Other transporters
Pores ion channels [TC:
1
]
HNV03_12365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Thioredoxin_3
Motif
Other DBs
NCBI-ProteinID:
QNT15381
LinkDB
All DBs
Position
2577823..2579085
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AA seq
420 aa
AA seq
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MKKISYLLSVIGLGIFAQAQEVTETVNNDYNKWSIEANGGAVKARKAFAPGYYSETPSFF
HADFGVRYMFNPKFGLKLDGGYDRIKEGEGVKNFKSNYYRVDLQGVVNVGRVLNFETWTN
RIGLLAHGGAGYSWMNNDATKGADGKVFDDNDNMANVMVGLTPQLRLTDRVVLTGDVSYV
RNIRQNVTFDGTANTSGSGFGGEIWNATLGLTFYLGKNQKHADWVYEPTRSDLEDRITNI
EQMLKDTDGDGVADYLDQEPDSAPGAVVDTHGVTIDHNGNGIPDNIEEYIKQNAGGNTTI
VNDADFLEQMINSGIINVYFDYNSDKPYQQSVGGIKFVSEYLKAKPNAQIEILGYADPVG
GDAFNKDLSRRRAENVKAILVNQGANASQLTTIGEGEDKEFKNSQVSSHQLARRVVFRVK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatttcatacctattaagtgtaattggattagggatttttgctcaagcgcaa
gaagtaactgaaacagttaacaacgattacaacaagtggtctattgaggccaatggaggt
gctgtgaaagcaagaaaagcattcgctccaggttattactctgaaactccaagttttttc
cacgcagactttggtgtgcgttatatgttcaatcctaaatttggtttaaaattagatggt
ggatatgaccgtatcaaagaaggagaaggtgttaaaaactttaaatctaactattacaga
gtagatttacaaggggttgtaaatgttggacgtgttttaaactttgaaacatggacaaac
agaattggattattagctcatggtggtgctggttattcttggatgaataatgatgcaact
aaaggtgctgatggtaaagttttcgacgacaatgataacatggcaaacgttatggttggt
ttaactcctcaattaagattaactgatcgtgttgttttaacaggagatgtttcttatgta
agaaatattcgtcaaaatgtaacatttgatggaactgctaacacttcaggttctggattt
ggaggtgagatttggaacgcaacattaggtttaactttctacttaggtaaaaaccaaaaa
catgctgactgggtttacgaaccaactcgttctgacttagaagatcgtatcactaacatc
gaacaaatgttaaaagatactgatggtgatggtgttgctgattacttagatcaagagcca
gattcagctccaggcgctgttgttgacactcacggtgttacaattgaccacaatggaaac
ggaattccagataatattgaagaatacattaaacaaaatgcaggaggaaatacaactatc
gttaatgatgctgatttcttagagcaaatgattaactctggtattatcaacgtttacttt
gattacaattctgataaaccataccaacaatcagttggaggtatcaaatttgtatctgag
tacttaaaagctaagccaaatgctcaaattgagattttaggttacgctgatccagtagga
ggagatgctttcaataaagatttatctcgtagaagagcagaaaatgttaaagcaatttta
gttaaccaaggagctaatgcttctcaattaactactattggtgaaggtgaagataaagag
ttcaaaaactctcaagtttcatctcatcagttagcaagaagagttgttttcagagtaaaa
taa
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