Empedobacter stercoris: HNV03_12425
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Entry
HNV03_12425 CDS
T06804
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
este
Empedobacter stercoris
Pathway
este03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HNV03_12425 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_12425 (ruvC)
Enzymes [BR:
este01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
HNV03_12425 (ruvC)
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HNV03_12425 (ruvC)
RecFOR pathway proteins
HNV03_12425 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Pox_A22
Arm_3
DUF460
DUF6445
Motif
Other DBs
NCBI-ProteinID:
QNT15392
LinkDB
All DBs
Position
complement(2590404..2590952)
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AA seq
182 aa
AA seq
DB search
MEKIILGIDPGTMVMGFGLIEVKNNKMKLITLDELLLHKLPNQQTKLKMIFEKTLAIIDQ
YHPDELAIEAQFFGVNVQSMLKLGRAQGVCIAACLHRDMPVVEYAPKKVKMAITGNGNAS
KEQVAGMLQHLLGLKEIPKRLDATDGLAVAVCHYLNSGKTSGTSSSYSGWDAFVKNNPNR
TK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagattattttagggattgatcctggtacaatggtgatgggttttggtttgatt
gaagtcaaaaacaacaagatgaaattaattacattagatgaattattgttgcataaactt
ccgaatcaacaaacgaaattaaaaatgattttcgaaaaaaccttggccattatcgatcaa
tatcatccagatgaactggccattgaagcgcaattttttggtgtaaatgttcaatctatg
ctaaaacttgggcgtgcacaaggtgtttgtattgcggcgtgtttgcatcgcgatatgcca
gttgttgagtatgctccaaaaaaagttaaaatggcaattactgggaatggaaatgcatct
aaagaacaagtagcaggaatgttgcaacatttgcttggcctgaaggaaattccaaagcgt
ttggatgccacagatggacttgctgttgcagtttgtcattatctaaattcaggaaaaaca
tcaggaacatcaagttcatattcaggttgggatgcttttgtgaaaaataatccgaatcga
acaaaatag
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