Empedobacter stercoris: HNV03_13340
Help
Entry
HNV03_13340 CDS
T06804
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
este
Empedobacter stercoris
Pathway
este03030
DNA replication
este03430
Mismatch repair
este03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNV03_13340 (dnaE)
03430 Mismatch repair
HNV03_13340 (dnaE)
03440 Homologous recombination
HNV03_13340 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
este03032
]
HNV03_13340 (dnaE)
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_13340 (dnaE)
Enzymes [BR:
este01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNV03_13340 (dnaE)
DNA replication proteins [BR:
este03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNV03_13340 (dnaE)
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNV03_13340 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
GLUCM-like_C
MCM10_OB
Intimin_C
Pullulanase_N2
Motif
Other DBs
NCBI-ProteinID:
QNT15552
LinkDB
All DBs
Position
2776212..2780612
Genome browser
AA seq
1466 aa
AA seq
DB search
MYLIYDTETTGLPKDWNAPISDSDNWPRCIQIAWQLHDEMGQIIEHQDYLVRPDGFDIPY
DSERIHGISTDLATEKGVPLKEVLDKFNEVLGKAKFIVGQNLGFDINIMGAEFYRLNYEN
NLAEKPVLDTCTEVTAELLKLPGGRGGRYKLPTLTELHEYLFGVPFGEAHNATADVEATT
RCFFELIRKGIFTKNELEVEDEYFVRFNEINQTNIQPIGLNHVNLKKASQEIAKAKAKEE
GGDEVVEISEEVLAQFEKAKFAHLHNHTQFSILQSTISVKDLVAAASKNKMPAVAMTDHG
NMMGAFHFNAEVQNHNKAAKEKNEELIAEGKEPTEVLITPIIGSEFFVCENHLDKSKKDN
GYQIVVFAKNKNGYHHLAKMASKAYTDGFYYVPRIDKAIIEEYKEDLIVLSGNLQGEVPN
KILNLGEKQAEEALLWWKEQFGDDFYIELMRHGQEDEDRVNQTLLAFARKHNVKVVATNN
TYYINQDDSNAHDILLCVRDAEKQSTPIGRGRGFRFGLPNQEYYFKSEAEMKQLFQDIPE
AIINIQEIVDKIEEYTLYRDVLLPKFDIPEEFHHAEDDEDGGKRGENAYLKHLTYEGAKI
RYPELTDEIKERLDFELATIEKTGYPGYFLIVQDFIAAARKMGVSVGPGRGSAAGSAVAY
CLWITNLDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSLVMDYVIDKYGANQVAQIIT
YGTMAAKSSIKDTARVLDLPLFDANRVAGLIPNMKLAKIFNLDDNALKGSLKPEEFDAVS
ELKRLSNGTDLAAETIQQAKILEGSVRNTGIHACGVIITPDDITNFVPVTTAKDSDLYVT
QFDNSVAESAGLLKMDFLGLKTLTLIKDTIKLVKARTGIEIDPDEIPIDDEKTYELFQRG
ETVGVFQYESPGMQKYMKDLRPTVFADLIAMNALYRPGPIEYIPSFVRRKNGEEPITYDL
DAMEEYLSETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKQKAVLDKMKPKFVAQ
ASEKGHDPKILEKVWTDWEAFASYAFNKSHSTCYAWVAYQTAYLKAHYPAEYMAAVLSNN
MNDIKQVTFFMEECKRMGLAVLGPDINESITKFNVNENYEIRFGMGAVKGVGQAAVNSII
SEREANGPFKDIYDFVKRVELRTVNKKTIENLVLAGGFDSFEFHRGRYFYIENTTTNLEK
LIKYGANYQEQKNSAQTSLFGDFGGDSVIEDVVPMLPDCEKWNMLQRLSKEKEVVGIYIS
SHPLDDFKHELKMASNCSISDINANEDNFVNKEVSICGMMSNIQHRIAKNGNEFGIFTFS
DYTDSMDIMVFGGDYLKYRHFMQENMFLNLKLNISKKEFKDKEGNVTQGRVYKNITNILL
LNEIVEKQAEKMTVKIEVPAFSEETFTKLSDIMYKYQGDKLLKIQLIDPKDYLNNLDLPA
GKIKINICRDLLKELDELQEITFKLN
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatatacgatacagagacaactggtcttccgaaagattggaatgcgccgatt
tctgactccgacaactggccacgatgtatacaaatcgcgtggcaattgcacgatgaaatg
gggcaaattattgaacatcaagattatttggttcgtccagatggttttgatattccgtac
gattctgagcgtattcacggaatttcaactgatttagctaccgaaaaaggagttccatta
aaagaagttttagataaattcaatgaagttttaggtaaagctaaatttattgttgggcaa
aatttaggtttcgatatcaacattatgggagccgaattttatcgtctgaattatgaaaat
aatttagctgaaaagcctgttttggatacatgtacagaagttaccgcagagttgttaaaa
cttcctggaggtcgtggaggtcgttacaaattaccaacgttaacagaattgcatgaatat
ctttttggtgttccatttggtgaagcacacaacgcaactgcggatgtggaagcaacgaca
cgttgtttttttgaattgattcgtaaaggtatttttacaaaaaatgaattagaagttgaa
gatgaatattttgttcgatttaatgaaatcaatcaaacaaatattcaaccaattggatta
aatcatgtcaatctaaagaaagcttcacaagaaattgcaaaagcaaaagcgaaagaagaa
ggaggtgatgaggtagttgaaatttcagaagaagttttagcgcagtttgagaaagcaaaa
tttgcacatttacataatcatacacaattctcaattttacaatcaacgatttctgttaaa
gatttagtagctgcagcttcaaaaaataaaatgcctgcggttgcaatgaccgatcatgga
aatatgatgggagcatttcattttaatgcagaagtacaaaatcataacaaagcagcaaaa
gaaaagaatgaagaattaattgcagaaggaaaagaaccaactgaagtgttaataacacct
attattggttcggaattttttgtttgtgagaatcatttagataaatcaaaaaaagataat
ggttatcaaatcgttgtttttgcaaagaataaaaatggttatcatcatttagcaaaaatg
gcatcgaaggcatatacagatggtttttactatgtgcctcgtattgataaagcgattatt
gaagaatataaagaagatttgattgttttatctggaaatttgcaaggtgaagttccaaat
aaaattttgaatcttggtgaaaaacaagccgaagaggccttgctttggtggaaagagcaa
tttggtgatgatttttacatcgaattgatgcgtcatggtcaagaagatgaagatcgtgtc
aatcaaacattgcttgcttttgcacgcaaacacaatgtaaaagttgtcgcaacaaataat
acctattacattaaccaagacgattcgaatgcccacgatattttgttgtgtgtacgagat
gccgagaaacaatcgactcctattggtcgtggtcgtggatttcgttttggtttgccaaat
caagaatattattttaagtcggaagcagaaatgaaacaattgtttcaagacattcccgaa
gcaattattaatattcaagaaattgttgataagatagaagaatacacgctttatcgagat
gtattacttccaaaatttgatattcccgaagaatttcatcacgcagaagatgatgaagat
ggaggaaaaagaggtgagaatgcttatttaaaacatttaacctacgaaggtgcaaaaatt
cgttacccagaattgaccgacgaaattaaagaacgtttggatttcgaattagccacaatt
gaaaaaacaggttatcctggttatttcttgattgtacaagatttcatcgcagcagctcgt
aaaatgggcgtatcggttggtccaggtcgtggttcggcggcaggatcagcagttgcttat
tgtttatggattaccaatttagatccgataaaatacgatttactttttgagcgtttctta
aatccagaccgtgtatctatgcccgatatcgatatcgactttgatgatgaaggacgatca
ttagtaatggattatgtgattgataaatatggagcaaatcaagtagcgcaaattatcaca
tacggaacaatggcggctaaatcttcgataaaagatacagcacgtgtattggatttacct
ttatttgatgccaatcgtgtagcaggtttaattccaaatatgaaattggcaaagattttc
aatttagatgataatgccttaaaaggatccttaaaaccagaagaatttgatgcggtaagt
gaattaaagcgtttatcaaacggaactgatttagctgctgaaactattcaacaagctaaa
atcttagaaggttctgtacgtaatacgggtattcatgcgtgtggagtgattattacgcca
gatgatatcaccaatttcgttcctgtaacaactgccaaagattcagatttatatgtgact
caatttgataactcggttgcagaaagtgccggattattgaagatggacttcttaggattg
aagaccttaaccttgattaaagatacgattaagttagtgaaggcaagaacaggaatcgag
attgatcctgatgaaattccaattgatgacgaaaaaacatatgagcttttccaacgaggt
gaaacagttggagtttttcaatacgaatcgcctggaatgcagaaatacatgaaggatctt
cgtccaactgtttttgcagatttaatcgccatgaacgccctgtatcgtccaggtccaatt
gaatatattccatctttcgttcgtcgaaaaaatggagaggaaccgattacctatgatttg
gatgcgatggaagagtatttatcagaaacctatgggattactgtttatcaggagcaagta
atgttactttcgcagaaattagcaggattctcgaaaggtgatgccgacgttttgcgtaaa
gctatgggtaaaaagcaaaaagctgtcttggataaaatgaaaccaaaatttgttgcgcaa
gcttcagaaaaagggcatgatcctaagattttagaaaaagtttggacagactgggaagcc
ttcgcatcgtatgcattcaacaaatcgcattcaacatgttatgcatgggtagcgtatcaa
acagcttatctgaaagcacattatccagcagaatatatggcggctgttctttcaaataat
atgaatgatatcaagcaagtgaccttctttatggaagagtgtaagcgaatgggattagct
gtacttggaccagatatcaacgaatccattacaaaatttaatgtaaacgaaaattacgag
attcgttttggaatgggagctgtaaaaggtgttgggcaagccgcagtaaactcgataatt
tctgaacgtgaagcaaatggtccgttcaaagatatatacgattttgttaaacgtgtcgaa
ttgcgaacagtgaacaaaaaaacaatcgaaaacttagttttagctggaggttttgattcg
tttgaatttcatcgtggacgttatttttatatcgaaaatacgacaactaatttggaaaaa
ttaatcaaatacggagcaaattatcaagagcaaaaaaactctgctcaaacctctttattt
ggcgattttggtggtgattctgtgatagaagatgtagtgccaatgctacctgattgcgag
aaatggaacatgttgcaacgtttatcaaaagaaaaagaagtggttggaatttatatttct
tctcatccattagatgatttcaaacatgagctgaaaatggcttccaattgtagtatttcg
gatattaatgcaaacgaggataattttgtcaacaaagaagtatcaatttgtggaatgatg
tcaaatattcaacatcgaattgcgaaaaatggaaatgaatttggtatttttacgttcagt
gattataccgattccatggatattatggtttttggaggagattatttgaaatatagacac
tttatgcaagagaatatgttcttgaatttgaaattgaatatctcgaaaaaagaattcaaa
gataaagaaggaaacgtgacgcaagggcgagtatataaaaatatcacgaatattctattg
ttaaatgaaattgtagaaaaacaagccgaaaaaatgacggtaaagattgaagtcccagca
ttttcggaagaaacttttaccaaactatcagatattatgtacaaatatcaaggagataaa
ttattgaaaatccaactaattgatccaaaagattatttgaataatttagatttgccagca
ggtaaaattaaaataaatatttgccgagatttgttaaaagaattagatgaattacaggag
attacatttaaactgaattaa
DBGET
integrated database retrieval system
