Empedobacter stercoris: HNV03_13540
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Entry
HNV03_13540 CDS
T06804
Name
(GenBank) HTH domain-containing protein
KO
K03093
RNA polymerase sigma-I factor
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
este03021
]
HNV03_13540
Transcription machinery [BR:
este03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HNV03_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_11
HTH_24
SGT1
HTH_DeoR
HTH_10
SUS_EPBD
CCDC32
HTH_28
Occludin_ELL
HTH_36
NUMOD1
DUF2089
HTH_Mga
HTH_17
Bap31_Bap29_C
HTH_Tnp_4
HTH_29
DNA_pol3_alpha
Motif
Other DBs
NCBI-ProteinID:
QNT15726
LinkDB
All DBs
Position
pES183-1:complement(2647..3099)
Genome browser
AA seq
150 aa
AA seq
DB search
MKQYNLKDLANKLDISERTARRYIDELINETQTIRENKYKFSYLIFNYIINSRQNIDIVL
TESDNGVTEYFTEEEYLEFQKRLTEYPILKEQIQNSKEYLNTIENQMEYFKNAYNKQLEM
HENLVQSVKNFSDNLMQRNYIEAKEKGLDQ
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatacaacttaaaagatttagctaataagttagatattagcgaaagaaccgca
agaagatacatagatgaactcattaacgaaactcaaactattagagaaaataaatacaaa
ttttcttatttaatctttaattacattattaattcaagacaaaatattgacattgttttg
acagaaagtgacaacggagtgacagagtattttacagaagaagagtatttagagttccaa
aaaagattaactgaatatcctattttaaaagaacaaattcaaaactctaaagagtattta
aatactatcgagaatcaaatggaatatttcaaaaatgcttacaataaacaattagaaatg
catgagaatttagttcaaagcgttaaaaatttttcggataatttaatgcaacgtaattat
attgaagcaaaagaaaagggattagaccaataa
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