Eubacterium siraeum 70/3: EUS_10890
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Entry
EUS_10890 CDS
T02590
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
esu
Eubacterium siraeum 70/3
Pathway
esu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EUS_10890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esu03019
]
EUS_10890
03016 Transfer RNA biogenesis [BR:
esu03016
]
EUS_10890
Enzymes [BR:
esu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EUS_10890
Messenger RNA biogenesis [BR:
esu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EUS_10890
Transfer RNA biogenesis [BR:
esu03016
]
Prokaryotic type
tRNA degradation factors
EUS_10890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
CBK96284
UniProt:
D4JT65
LinkDB
All DBs
Position
1087722..1089839
Genome browser
AA seq
705 aa
AA seq
DB search
MFENYKTFKTTFAGRELMVETGKVCGLANGSCWVHYGETVVMVNVTASAKPREGVDFFPL
AVDYEEKLYAVGKIPGGYLKREGRPSEKAILNSRVVDRPMRPLFPKDMRNDVAIVMTVLA
VDPETQPEIIAMIGASIAVSISDIPWNGPIGGISVGLVDGEIVLMPNAEQRAKSDLQLTV
ASSEKKVVMIEAGANEVDDDTMLKAIMAGHEEINKSLIPFIKQIQAEIGKPKFSFPSMEV
DHDLFEAIQNKYTEQVKFALDTDDKNVREERLQPIKDAIHAEFDEQYPDKAAMIDECIYK
LQKFIVRRWLLDEQKRVDGRGMDEMRPLAAEVGLLPRVHGSGLFTRGQTQVMTITTLGPV
SDSQKLDGIDEEETKRYMHHYNFPAYSVGETKASRGPGRREIGHGALAQRALEPVIPPVE
EFPYAIRLVSEVLSSNGSTSQASICGSTLSLMDAGVPIKSPVAGISCGLITEGDRWMTMV
DIQGLEDFFGDMDFKVGGTHKGITAIQMDLKIDGLTPEIIKDAFAKTHKARDYILDEIML
KAIPEPRPTVNKYAPKMLNYKVPVDKIREVIGTGGKVIQKLCADFEVKIDIDEEGNVFIC
GQDLEKAQNCIAMIKAITSPPEVGAIYKGKVVRIMNFGAFVEIAPGKDGMVHISELENRR
VEKVEDVVSIGDEIIVKVLEIDNQGKIRLSRKAALAEIEAKKKNG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaattacaaaacattcaaaacgacatttgcaggccgtgagcttatggtcgaa
accggtaaggtatgcggacttgcaaacggttcttgctgggtacactacggtgaaacagtc
gtaatggtaaacgttacagcaagcgcaaagcccagagagggtgttgactttttccctctt
gcagttgactacgaagaaaagctctacgcagtaggtaaaattcccggcggttacttaaag
agagagggcagacccagcgaaaaggctatactgaactcccgtgtagttgaccgtcctatg
cgtcctctgttccccaaggatatgagaaatgacgttgctatcgttatgacggttctcgca
gtagatcccgaaacacagcctgaaatcatcgctatgatcggcgcttctatcgcagtttcc
atttccgatattccgtggaacggtcctatcggcggtatctccgtaggtcttgttgacggt
gagattgttcttatgcccaacgcagagcagagagcaaagtcagaccttcagctgaccgtt
gcgtcgagcgagaagaaggtcgtaatgattgaagccggcgcaaacgaagttgacgatgat
acaatgctgaaggctattatggcaggtcacgaagagatcaacaagtcacttatccccttc
atcaagcagattcaggctgagattggcaagcccaagttcagcttcccctcaatggaggtt
gatcacgatctgttcgaggctattcagaacaagtacaccgagcaggtaaagttcgctctt
gatacagacgacaagaatgtccgtgaggagcgtttacagcctataaaggatgctatccac
gcagagtttgacgagcagtatcccgacaaggccgctatgattgacgagtgcatctacaag
ttacagaagttcatcgtaagacgttggctgttagacgagcagaagcgtgttgacggcaga
ggtatggacgagatgcgtcctcttgccgctgaagtaggacttctccccagagtacacggc
tcaggtctgtttacccgtggtcagacacaggttatgacaatcacaaccttaggccctgta
agcgacagccagaagctcgacggcattgacgaagaagaaacaaagcgttatatgcaccac
tataatttccctgcatactctgtaggcgaaacaaaggcaagcagaggccccggcagacgt
gagatcggtcacggcgcacttgcacagagagcgctcgaacccgttatccctcccgttgaa
gaattcccctacgcaataagacttgtatctgaagtgctttcttcaaacggttcaacatca
caggcttctatctgcggttctacgctttcactgatggacgcaggcgttccgataaagtca
cctgttgcaggtatttcctgcggtcttatcacagagggcgaccgttggatgacaatggta
gacattcagggtcttgaggacttcttcggcgatatggacttcaaggtaggcggtactcat
aagggtatcacagctatccagatggatcttaagatcgacggtcttacacccgagattatc
aaggacgcatttgcaaagacacacaaggcaagagattacatccttgacgaaataatgctc
aaggcaattcccgaaccccgtcccactgtaaacaagtacgcacccaagatgctcaactac
aaggtacccgttgacaagataagagaagttatcggtacaggcggtaaggttattcagaag
ctctgcgcagacttcgaggttaagattgacattgatgaagaaggcaatgtattcatctgc
ggtcaggatcttgaaaaggctcagaactgcatagcgatgataaaggctatcacatctcct
cccgaggttggcgctatctacaagggcaaggttgttcgtataatgaacttcggtgcgttt
gttgagattgctcccggcaaggacggtatggtacacatttcagagcttgaaaacagacgt
gtagaaaaggttgaagatgttgtttcaatcggtgacgagataatcgtaaaggttctcgaa
atcgacaatcagggtaagataagactttcaagaaaggctgctcttgctgaaatcgaagca
aagaagaaaaacggctga
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