Williamsoniiplasma somnilux: ESOMN_v1c01620
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Entry
ESOMN_v1c01620 CDS
T05210
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
esx
Williamsoniiplasma somnilux
Pathway
esx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
esx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ESOMN_v1c01620 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esx03021
]
ESOMN_v1c01620 (rpoA)
03400 DNA repair and recombination proteins [BR:
esx03400
]
ESOMN_v1c01620 (rpoA)
Enzymes [BR:
esx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ESOMN_v1c01620 (rpoA)
Transcription machinery [BR:
esx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ESOMN_v1c01620 (rpoA)
DNA repair and recombination proteins [BR:
esx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ESOMN_v1c01620 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ATZ18547
UniProt:
A0A2K8NXN3
LinkDB
All DBs
Position
175855..176808
Genome browser
AA seq
317 aa
AA seq
DB search
MKQFMRPEFTLLKEENNKTYGKFMVEPLERGFGVTLGNAIRRTLLAATPGAAVFAIKLDG
AAHEFTAINGIVENVSRIILNIKNLVLKIDEKMYSDDEVVELKIKSSVTGPVKAAELVVP
AGVEVLNKDLHIATIADGGVFNLTLFAKNSRGYKSFKDNKKEKGVENGAITIDSNYSPIV
KVAYNVDTTKIGRSIDLEKLEIEVNTDGSITAVEAIATAAKVLVAHLEFFVNLSSQLDNV
EIIGIADEDEKELDKTVEELDFTQRSLNCLKRAGIDSLRELVSRSEDEIQEIRNLGRKSF
KEIKDKVAQLSLTFKQV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatttatgagaccagaattcactcttcttaaagaggaaaataataaaacatat
ggtaagtttatggttgaaccacttgaaagaggattcggagttactctaggaaacgcaatt
agaagaactttattagcagcaacccctggagcagcagtattcgcaatcaaacttgacggt
gcggctcatgaatttacagcaatcaacggaattgttgaaaatgtatcaagaataatcttg
aacattaaaaacttagttttaaaaattgatgaaaaaatgtatagtgatgatgaagtagtt
gaattaaaaatcaaatcatcagtaactggaccagttaaagctgcagaacttgtagttcct
gctggagttgaagttttaaataaagatttacacatcgcaacaatcgctgatggaggagtt
tttaatttaacattatttgctaaaaactcacgtggatataaatcatttaaagacaacaaa
aaagaaaagggtgtagaaaatggagcaattacaattgattcaaactactcaccaatcgtt
aaagttgcttacaatgtagatactactaaaatcggtcgttcaattgatttagaaaaatta
gaaatcgaagttaatactgatggatcaattacagctgttgaagcaattgcaacagctgct
aaagttcttgtagcacacttagagttctttgttaacttgtcttcacaattagataatgtt
gaaattattggaattgctgatgaagatgaaaaagaattagataaaacagttgaagaatta
gactttacacaaagaagtttaaactgtttaaaacgtgccggaattgatagcttaagagaa
ttagtttctcgtagtgaagatgaaatccaagaaattagaaacttaggacgtaaatcattt
aaagaaattaaagataaagttgctcaattaagtttaacttttaaacaagtataa
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