Williamsoniiplasma somnilux: ESOMN_v1c05170
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Entry
ESOMN_v1c05170 CDS
T05210
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
esx
Williamsoniiplasma somnilux
Pathway
esx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESOMN_v1c05170 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esx03019
]
ESOMN_v1c05170 (deaD)
03009 Ribosome biogenesis [BR:
esx03009
]
ESOMN_v1c05170 (deaD)
Enzymes [BR:
esx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ESOMN_v1c05170 (deaD)
Messenger RNA biogenesis [BR:
esx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ESOMN_v1c05170 (deaD)
Ribosome biogenesis [BR:
esx03009
]
Prokaryotic type
rRNA helicases
ESOMN_v1c05170 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Cas3-like_C_2
Helicase_C_2
AAA_19
Cas_GSU0054
UvrA_inter
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ATZ18899
UniProt:
A0A2K8NYK3
LinkDB
All DBs
Position
complement(610380..612050)
Genome browser
AA seq
556 aa
AA seq
DB search
MEFKELKLREELLRILEKRNFSTPTEIQEKAIPVFLDGQNIFGKSGTGTGKTATFVLPIL
QNIDTESKKVQAVILAPTRELALQILETINILSSHIPNLKTASLIGGMGIVDQIKKVKIS
QIVVGTPGRVADHLNRKTLNTQNVKTVILDEADEMLKMGFKNEIDLFFKSIEQKVQVGLF
SATTTPKVLELAQKYMGEYTFVEIKNEVKVNDNINSEFVYTTNKNKEIILINFFMAKKPK
KAIVFTNTKSHTEKIAKNLNSFGFKSVVINGDKKQSQRSASIRRFKSEEFNVLVATDVVG
RGIDIDDVDFVINYDIPKENEQFIHRIGRTGRNNKMGDTISFVSTKEALRQVKDIQKHYQ
IKIHEITDEEFMKEIDESLRIAHIEPYESRDFRRGDDRRNSRGRDNGRNRNFSKSNDWNK
NSRRRDGYKKKTNNDSEKTYARKSRNFEDKENFSSKESFGDKPKRSYGDKPRSRSNNNFG
DKPKRSYGDKPRSKSSENFSDKPKRSYGDKPKSRSNDNFKNKPKRNFDEKPRFENSEIIS
DKPKRRTTNSIKKKNN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaagaattaaaactaagagaagaattgttaaggattttagaaaaacgaaac
ttctcaacaccaactgaaatacaagaaaaagcaattcctgtatttttagatggacaaaat
atatttggtaaatcaggaacaggaacaggaaaaactgcaacttttgtactaccaatttta
caaaatattgacacagaatcaaaaaaagtacaagcggttattttagcgccaactagagaa
ttggcattacaaattcttgaaacaattaatattttgtcttcacacatacctaatttaaaa
acagcatctttaatagggggtatgggaattgttgatcaaattaaaaaggtgaaaatatca
caaatcgttgtaggaactccgggaagagttgcagatcacttaaaccgtaaaactctaaat
acacaaaatgttaaaactgttattttagatgaagctgatgaaatgttaaaaatgggattt
aaaaatgaaattgatttattttttaaatcaattgaacaaaaagttcaagttggattattt
tcggcaacaacaacccctaaagtattagaattagctcaaaaatatatgggtgaatatact
tttgttgaaataaaaaatgaagtaaaagttaacgacaacattaatagtgaatttgtttat
acaacaaacaagaataaggaaattattttaataaacttttttatggctaaaaaacctaaa
aaagcaattgttttcacaaacactaaatcacacactgaaaaaattgcaaaaaatttaaat
agttttggttttaaatcagttgtaattaatggtgataaaaaacaaagtcaaagaagtgct
tctattagaagatttaaaagtgaagaatttaatgttttagtggcaactgatgttgttggg
cgtggaatcgatattgatgatgtagattttgttattaactatgatattcctaaagaaaac
gaacaatttattcaccgtatcggaagaacaggtagaaataacaaaatgggagatactatt
tcttttgtttctactaaagaagcattgcgtcaagtaaaagacattcaaaaacactatcaa
attaaaattcatgaaataacagatgaagaatttatgaaagaaattgatgaatctttaaga
attgctcatatagaaccatatgaaagtagagactttagacgtggtgatgatcgtagaaat
tctcgtggtcgtgataatggtagaaatagaaatttttcaaaatcaaatgattgaaacaaa
aattctcgtcgtcgtgatggttataaaaagaagacaaacaatgattctgaaaaaacttat
gctcgtaaatctagaaattttgaagataaagaaaatttttcatcaaaagaatcttttggt
gacaaaccaaaaagaagctatggcgataaaccaagatcaagatcaaacaacaactttggt
gacaaaccgaaaagaagttacggtgacaaaccacgctcaaaatctagcgaaaactttagt
gacaaaccaaaaagaagttacggcgataaaccaaaatcaagatcaaatgataattttaaa
aacaaaccaaaaagaaattttgatgaaaagcctcgttttgaaaatagtgaaataattagt
gacaaaccaaaaagaagaacaactaactcaattaagaaaaaaaataattaa
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