Williamsoniiplasma somnilux: ESOMN_v1c05480
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Entry
ESOMN_v1c05480 CDS
T05210
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
esx
Williamsoniiplasma somnilux
Pathway
esx00010
Glycolysis / Gluconeogenesis
esx00020
Citrate cycle (TCA cycle)
esx00260
Glycine, serine and threonine metabolism
esx00280
Valine, leucine and isoleucine degradation
esx00620
Pyruvate metabolism
esx00630
Glyoxylate and dicarboxylate metabolism
esx00640
Propanoate metabolism
esx00670
One carbon pool by folate
esx00785
Lipoic acid metabolism
esx01100
Metabolic pathways
esx01110
Biosynthesis of secondary metabolites
esx01120
Microbial metabolism in diverse environments
esx01200
Carbon metabolism
esx01210
2-Oxocarboxylic acid metabolism
esx01240
Biosynthesis of cofactors
Module
esx_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
esx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
ESOMN_v1c05480 (pdhD)
00020 Citrate cycle (TCA cycle)
ESOMN_v1c05480 (pdhD)
00620 Pyruvate metabolism
ESOMN_v1c05480 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
ESOMN_v1c05480 (pdhD)
00640 Propanoate metabolism
ESOMN_v1c05480 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ESOMN_v1c05480 (pdhD)
00280 Valine, leucine and isoleucine degradation
ESOMN_v1c05480 (pdhD)
00310 Lysine degradation
ESOMN_v1c05480 (pdhD)
00380 Tryptophan metabolism
ESOMN_v1c05480 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
ESOMN_v1c05480 (pdhD)
00670 One carbon pool by folate
ESOMN_v1c05480 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esx04147
]
ESOMN_v1c05480 (pdhD)
Enzymes [BR:
esx01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
ESOMN_v1c05480 (pdhD)
Exosome [BR:
esx04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
ESOMN_v1c05480 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
Biotin_lipoyl_2
AlaDh_PNT_C
FAD_binding_2
FAD_oxidored
GIDA
GCV_H
3HCDH_N
RnfC_N
NAD_binding_8
FAD_binding_3
Thi4
NQRA_N
HI0933_like
PTS_EIIA_1
ATP-synt_ab_Xtn
DAO
Motif
Other DBs
NCBI-ProteinID:
ATZ18930
UniProt:
A0A2K8NYM8
LinkDB
All DBs
Position
complement(642444..644267)
Genome browser
AA seq
607 aa
AA seq
DB search
MFEVKFADIGEGLTEGKVTEILVKIGDQVKMGDSLFHVETDKVNSEIPTPVAGTIAKILV
KPDEEIKVGQVVFVIDDGSTSSPVKEENKSEAKSEPVEENASVVGSTPVSNDVLPSRAPE
AQKPSQPTIQKSSVKYDTKEDFDVIVVGAGIGGYVSAIKVAQLGLKAMIVEKQYYGGVCL
NVGCIPTKALLKAAKAFDIALNKNDVFGISYPGNVKPSLDWKKVQSRKDDIVGKLTGGVR
YLLDKNKVKRIEGKAQALDPNTVEVDGIKYGCKNLIIATGSVPNSLPLPGFAEAAKSGYL
INSTGALSLPTIPKKLVIIGGGVIGVEFACLYANVGVEVTILQGLPTILEMLDKDVITEM
TKQLKERYKINVITNAKIKEIKDKSVIYELDGKEQKITTDYCLESVGRKTVIDGFENMGL
DITDRKAINVDDYCETNIEGVYAIGDVIGKAMLAHVASHAGIVAANRIAMKNGSSKAHDI
KMDFAKIPSCIYTSPEVAMIGKTEQQLEKEGVEYKAFKFPFSAIGKALVDDHPYGFVKLI
VEPKYKTVLGAHIIGSTATEMISEITTLIECEGTITEVARAIHPHPTMSEAIGEVAEALE
TGLPINL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagtaaaatttgcagatattggagaaggtttaactgaaggtaaagttactgaa
attttagttaaaattggagaccaagtaaaaatgggggatagtttatttcacgttgagact
gataaagttaattctgaaattccaactcccgttgcagggacaattgctaaaatcttagtt
aaacccgatgaagagattaaggttggacaagtggtttttgtaatcgatgatggttcaaca
tcatcacctgtaaaagaagaaaataaatcagaagcaaaatctgaaccagttgaagaaaat
gctagtgttgttggttcaacaccagtatcaaatgacgttcttccaagtcgtgcaccagaa
gctcaaaaaccttctcaaccaacaattcaaaaatcaagtgttaaatatgacacaaaagaa
gattttgatgtaattgttgttggagcgggaattggaggatacgtttctgcaattaaagtt
gcgcaactaggtttaaaagcaatgattgttgaaaaacaatattatggaggagtttgttta
aatgttggatgtattccaaccaaagcattattaaaagcagcaaaagcctttgatattgct
ttaaataaaaatgatgtttttggaatttcatacccagggaatgttaaaccttctttagat
tgaaaaaaagttcaatctcgtaaagatgatattgttggtaaattaactggaggagttcgt
tatttactagataaaaataaagttaaacgcattgagggaaaagctcaagctttagatcca
aatactgttgaagttgatggaattaaatatggatgtaaaaatttaatcatcgcaactgga
tcagttccaaattcattacctttaccaggatttgctgaagcagctaaatcaggttattta
atcaattcaactggtgctttatctttacctactattcctaaaaaattagtaattattggt
ggaggagttattggtgttgaatttgcttgtttatatgcaaatgttggcgtagaagtaact
atattacaaggattacctacaattttagaaatgcttgataaagatgtaattactgaaatg
actaagcaattaaaagaacgttacaaaatcaatgttataactaatgcaaaaattaaagaa
attaaagataaatcagttatatatgaacttgatggaaaagaacaaaaaatcacaactgat
tattgtttagaatctgttggaagaaaaactgttattgatggttttgaaaatatgggatta
gacataactgatagaaaagcaattaatgtagatgattattgtgaaactaacattgaagga
gtttatgcaatcggtgacgttattggtaaagcaatgttagcgcatgtggcatcacatgca
ggaattgttgctgcaaatagaattgctatgaaaaatggaagttctaaagcacatgatatt
aaaatggattttgcaaaaattccaagttgtatttatacatctcctgaagttgcaatgatt
ggaaaaactgagcaacaacttgaaaaagaaggcgttgaatacaaagcatttaaatttcca
ttctcagcaattggaaaagctttagttgatgatcatccttacgggtttgttaaactaatt
gttgaacctaaatataaaactgtactaggagctcacataattggttcaacagcaacagaa
atgatttctgaaattacaacattaattgaatgtgaaggaacaataactgaagttgcaaga
gcaattcaccctcacccaactatgagtgaagcaattggtgaagttgcagaagctttagaa
acaggtttaccaatcaatttataa
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