Williamsoniiplasma somnilux: ESOMN_v1c06780
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Entry
ESOMN_v1c06780 CDS
T05210
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
esx
Williamsoniiplasma somnilux
Pathway
esx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
esx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ESOMN_v1c06780 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esx03021
]
ESOMN_v1c06780 (rpoC)
03400 DNA repair and recombination proteins [BR:
esx03400
]
ESOMN_v1c06780 (rpoC)
Enzymes [BR:
esx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ESOMN_v1c06780 (rpoC)
Transcription machinery [BR:
esx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ESOMN_v1c06780 (rpoC)
DNA repair and recombination proteins [BR:
esx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ESOMN_v1c06780 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
ETC_C1_NDUFA5
Motif
Other DBs
NCBI-ProteinID:
ATZ19060
UniProt:
A0A2K8NZ00
LinkDB
All DBs
Position
complement(793486..797241)
Genome browser
AA seq
1251 aa
AA seq
DB search
MENRNKKSIKIELASPETIRSWSHGEVTKPETINYKTLKAEKEGLFDERIFGPTKNYECA
CGKYKKANPMNKGKVCEKCGVELTESIVRRERMGHIELEEPVTHIWMLKVAPSRIAAILN
LKTKELEEVVYFVSHIVLETGDAKILKSGEVLNLGSTKASKTREKLATLIKGVQEKVEAE
PESRDYRKATRLLAELENTAIPFSIDEACALIAKHTGAKFGIGAEAVEYLLKEIKIEETI
VELKNELREKRGSVDATKIMKRLEVLDSLKKSGARPEWMILRVLPVIPPDIRPIIQLDGG
RFTTSEINDLYRRIIIRNERLKKVKEMDAPSVIVNNEKRMLQEAVDALLDNERKPRPVMG
KDKRPLKSLTSTLKGKQGRFRQNLLGKRVDYSGRSVIAVGPTLKMYQVGLPRDMAITLFK
PFVIQWLQEHEFAENVKVAEKMLQQNDPKIWEALEQVIKDRPVLLNRAPTLHRLGIQAFE
PKLVKGKAIRLHPLVTTAFNADFDGDQMAVHVPITKEAIGEARALMLGSNAILGPKDGKA
IVTPTQDMILGNYYVTLEEKGVEGEGMMFANMADALTAYEQKIVNLNALIGIAISALPTE
KFIEEDQDKYLVTTVGKILFNNIFTQKFPWINTGNIYGAEVAIKDYILPFSKDINEFIKA
YKITQPIKKKELSTIIERYFAEYKARLTAEMLDNMKDLGYKFSTKSGTTISAGDVVAYTK
KYEEFKDADKKVQEISEFYNMGMLTANEKKRRVIDVWSAVKDNIQKELETILRTDIKNPV
FVMADSGARGNVSNFTQLVGMRGLMNDTKGDIKEIPIKSSFREGLSVSEFFISTHGARKG
MADIALKTADSGYLTRRLVDVSQEIVITGEDCQPIGGYSVSAIVETKHDNVIVPLKDRLI
NRFAFENIEDVKGNIIVTKDQLITKALAEKIVAADIKKVNIRSVLTCDNAKGICQKCYGV
NLATGEVVKVGEPVGVIAAQSIGEPGTQLTMRNFHTGGVAGDADITQGLPRIKELLDVTT
PKGSVAIISEIEGEVTEVSTVDGVSTIVVTSDGDSRKYRTQFHAVLRVEKGELVKPGQKL
TEGAIDLRQLLEVANIEDVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVRIVDGM
DSDLLPGEIITSQAYKTEVAKAMGAGQQPPLAAPIIFGIKKAPLESDSWLSSASFQDTAR
VLSKAIIRGKVDKLEGLKENIMLGNLIPAGTGLTGAEEVMRIGEEYHKNEY
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagaaataaaaaatctatcaaaattgaattagcttccccagaaactattcgt
tcatgatcgcatggagaagtaactaaaccagaaacaattaactacaaaacattaaaagcc
gaaaaagaaggtctatttgacgaaagaatttttggaccaaccaaaaactatgaatgtgct
tgtggaaaatataaaaaagcaaacccaatgaacaaaggaaaagtttgtgaaaaatgtggg
gttgaattaactgaatcaatcgttagacgtgagagaatgggacatattgaattagaagaa
cctgttactcatatttgaatgttaaaagttgctccttcaagaattgcagcaattttaaat
ttaaaaactaaagaattagaagaagttgtttacttcgtttctcacattgttttagaaaca
ggagatgcaaaaattttaaaaagcggtgaagttttaaatttaggatcaactaaagcttca
aaaactcgtgaaaaattagcaactttaattaaaggtgtgcaagaaaaagttgaagcggaa
ccagaatcaagagattaccgaaaagctacaagattattagcagaattagaaaacacagca
attcctttttcaatcgatgaagcttgtgcattaattgctaaacatactggtgctaaattt
ggaattggtgctgaagcagttgaatacttattaaaagaaattaaaattgaagaaacaatt
gttgaattaaaaaatgagctacgtgaaaaacgtggttctgttgatgcaacaaaaattatg
aaacgtttagaagttttagattcattaaaaaaatctggagcaagacctgaatgaatgata
ttgagagtgttaccggttatacctccagatattcgtccaattattcaattagatggtggg
cgtttcacaacttcagaaattaatgatttatatagaagaattattattagaaatgaaaga
ttaaaaaaagttaaagaaatggatgcgccttcagttattgttaacaacgaaaaacgtatg
ttacaagaagctgtggatgctttattagacaacgaacgtaaacctcgtcctgtgatggga
aaagacaaacgtccattaaagtctttaacttcaacattaaaaggaaaacaaggacgtttt
cgtcaaaatttattaggtaaacgtgttgattattcaggacgttcagtaattgctgttggt
ccaacattaaaaatgtatcaagtgggactacctcgtgatatggcaattactttatttaaa
ccatttgtaattcaatgattacaagaacatgaatttgccgaaaacgttaaagtggctgaa
aaaatgttacaacaaaacgatccaaaaatttgagaagctttagaacaagttatcaaagat
cgtccagtgcttttaaaccgtgctcctactttacaccgtttaggaattcaagcctttgaa
cctaaattagtaaaaggtaaagcaattcgtttacacccattggtaacaactgcatttaat
gccgatttcgatggagaccaaatggctgtccatgtaccaattactaaagaagcaatcgga
gaagctcgtgctttaatgctgggttcaaacgcaattttaggaccaaaagatggaaaagcc
attgttactccaactcaagatatgattcttggtaactattatgttactttagaagaaaaa
ggtgttgagggagaaggaatgatgtttgcaaacatggcagatgccttgactgcttatgaa
caaaaaattgttaacctaaacgctttaataggaattgcaatttctgctttaccaacagaa
aaatttattgaagaagatcaagataaatatttagtaactacagttggtaaaattttgttt
aataatatttttactcaaaaatttccatgaattaacacaggaaatatctatggtgcagaa
gtagcaattaaagattacattttacctttctcaaaagatattaatgagtttattaaagct
tataaaattactcaaccaattaagaaaaaagaattatcaactattattgaaagatacttc
gctgaatacaaagcacgtttaacagccgaaatgttggataacatgaaagatttgggatac
aaattttcaactaaatcagggacaacaatttctgctggtgacgttgttgcctacactaaa
aaatatgaagaattcaaagatgctgacaaaaaagttcaagaaatttctgaattctataat
atgggaatgttaacagcaaatgagaaaaaacgtcgtgtaattgatgtttgatccgctgtt
aaagataacattcaaaaagaacttgaaacaatcttgcgtactgacattaaaaacccagta
tttgtaatggctgattcaggtgctcgtggaaatgtttcaaactttacccaacttgtaggg
atgcgtggattgatgaatgataccaaaggggatattaaagaaattccgattaagtcatca
ttccgtgaaggattatcagtttctgagttcttcatctcaacgcacggtgctagaaaagga
atggctgatattgccttaaaaacagctgattcaggttacttaactcgtcgtttagttgac
gtttcgcaagaaattgttattactggtgaagactgtcaaccaattgggggatattcagtt
tctgcaattgtagaaacaaaacatgataatgtaattgtgccgttaaaagaccgattaata
aaccgttttgcttttgaaaatattgaagatgttaaaggtaatatcattgttaccaaagat
caattgattaccaaagcgttagctgaaaaaattgttgcagccgatattaaaaaagtaaat
attagatcagtattaacttgtgataatgctaaaggtatttgtcaaaaatgttacggagtt
aacttggcaactggtgaagttgttaaagttggagagccagttggagtaattgctgcgcaa
tcaattggagaaccaggaacacaacttactatgcgtaacttccatactggaggggttgcc
ggggatgctgatattacccaaggattaccgcgtattaaagaattgttagacgtaactact
cctaaagggtcagttgctatcatttctgaaattgaaggagaagttactgaagtttcaaca
gttgatggagtttctacaattgttgtaacaagtgatggagattcaagaaaatacagaacc
caatttcatgctgttttaagagtggaaaaaggggaattggtaaaacctggtcaaaaatta
accgaaggagcaattgacttgcgtcaattgctagaagttgctaatattgaggatgtacaa
aattacattttaaaagaagtgcaaaaagtttaccgtttacaaggaatagaaatttctgat
aaatacattgaaattattgttaaacaaatgttgaacaaagttcgtattgttgacgggatg
gattcagacttattaccaggagaaattattacatcccaagcttataaaactgaagttgct
aaagcaatgggtgctggtcaacagccgccattagctgctccaattatttttggaattaaa
aaagctccattagaatcagattcgtgattatcatctgcatcattccaagatactgctaga
gtgttatcaaaagcaattattcgtggaaaagtagataaattagaaggattaaaagaaaac
attatgctaggaaacttaattcctgccggaactggtttaacaggtgctgaagaagtaatg
agaattggtgaagaataccataaaaatgaatattag
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