Enterococcus saccharolyticus: ACMHDP_03090
Help
Entry
ACMHDP_03090 CDS
T11148
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
esy Enterococcus saccharolyticus
Brite
KEGG Orthology (KO) [BR:
esy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esy03009
]
ACMHDP_03090 (rlmD)
Enzymes [BR:
esy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACMHDP_03090 (rlmD)
Ribosome biogenesis [BR:
esy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACMHDP_03090 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Cons_hypoth95
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_15
MTS
RrnaAD
N6_N4_Mtase
PrmA
Spt20_SEP
Motif
Other DBs
NCBI-ProteinID:
XOE05206
LinkDB
All DBs
Position
complement(589834..591207)
Genome browser
AA seq
457 aa
AA seq
DB search
MKQYPVTKNQQIEATIIDLSHEGMGIAKVDGYPIFIENALPEEEVRVKILKVGNKFGFGK
VMEILKPSPDRQTVENEDLLRTGIAPLSHLRYEKQLEFKQQQVQNVLTKVAKMPEITVLP
TLGMEAPYAYRNKAQIPVRKIDGQLATGFYRKNSHQLVPIEDFFIQDPAIDAAIVTVRNI
LQRFNIKAYNEEFNEGFMRHIVIRRGHYSHEMMVVLVTRKAKFFKGKEIAQVIHDELPEV
VSVVQNVNEEKTNVILGKEEKVLFGKGYIEDELLGKKFHISAKSFYQVNTKQTEVLYQKA
IELADLKATDVVIDAYAGIGTIGLSIADKVDHVYGMETISEAVDDARDNAKLNAIDNATY
LVGRAEKVMPQWAKEDIAPNVIFVDPPRKGLDQTFIQAACDMKPEKIVYISCNPATMARD
LTHFAELGYTTNTVQPVDLFPQTTHVETVVLLSRIEK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatatccagtaacgaaaaatcaacaaatcgaagcaacaatcatcgatttatca
catgagggaatgggcatcgcaaaagttgacggctatcctatttttattgaaaatgccttg
ccagaagaagaagtgcgagtaaaaattttaaaagttggcaataaatttggttttggtaaa
gtcatggaaattttaaagcctagtccagatcgtcaaacagttgaaaatgaggatttgcta
cgaacagggattgcaccattaagtcatttacgttatgaaaaacaattagaatttaaacaa
caacaagtccaaaatgtgttaactaaagttgctaaaatgcctgaaattactgttttacca
actttaggaatggaagcaccttatgcttatcgcaataaagcacaaattccagttcgtaaa
atcgatggtcaattagctacaggcttttatcgtaaaaacagtcatcaattagttccaatc
gaagacttttttattcaagacccagcaattgatgcggcgatagttactgtccgcaacatt
ttacaacgcttcaatatcaaagcgtataacgaagaatttaacgaaggatttatgcgacat
atcgtgattcgtcgtggtcactattctcatgaaatgatggttgttttggtaacgcgaaaa
gctaaattctttaaaggaaaagaaatcgctcaagtcattcatgacgaattaccagaagtt
gtttcagttgtccaaaatgttaatgaagaaaaaacaaacgtgattttagggaaagaagaa
aaagttttatttggaaaagggtatattgaagatgaattattagggaaaaaattccatatt
tctgctaaatctttctaccaagtaaacacgaaacaaacagaagttctttaccaaaaagca
attgaattagctgatttaaaagcaacagacgtagtgattgacgcttatgctggaatcggc
accattggtttatcaattgccgataaagtagaccacgtgtatggaatggaaacaattagc
gaagcagtcgatgatgcacgtgataatgccaaattaaatgctattgacaatgcgacctat
ctagttggacgtgcagaaaaagtgatgccacaatgggcaaaagaagacatcgcaccaaat
gttatctttgtagatccaccacgtaaaggcttagatcaaactttcatccaagcagcttgc
gatatgaaaccagaaaaaatcgtttatatctcttgtaacccagctacaatggcgcgtgac
ttaacacactttgcagaattaggttatacgactaataccgtacaaccagtagatttattc
cctcaaacgacgcatgttgagacggttgtattgctgtcaaggatagaaaagtaa
DBGET
integrated database retrieval system
