Enterococcus saccharolyticus: ACMHDP_03925
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Entry
ACMHDP_03925 CDS
T11148
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
esy Enterococcus saccharolyticus
Brite
KEGG Orthology (KO) [BR:
esy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esy03032
]
ACMHDP_03925 (topA)
03400 DNA repair and recombination proteins [BR:
esy03400
]
ACMHDP_03925 (topA)
Enzymes [BR:
esy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACMHDP_03925 (topA)
DNA replication proteins [BR:
esy03032
]
Prokaryotic type
DNA Topoisomerases
ACMHDP_03925 (topA)
DNA repair and recombination proteins [BR:
esy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACMHDP_03925 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
Motif
Other DBs
NCBI-ProteinID:
XOE05368
LinkDB
All DBs
Position
complement(769488..771566)
Genome browser
AA seq
692 aa
AA seq
DB search
MAYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDVENNYEPHYISIRG
KGDVIKSLRSAAKKAQKVYLASDPDREGEAIAWHLAHLLGLDLNEKNRVVFNEITKDAVK
AAFKEPRTIDLDLVDAQQARRVLDRLVGYSISPILWRKVKKGLSAGRVQSVALKIIIDRE
KEIREFKPEEYWSIDGNFKKGRKKFKANFWGIDGKKKKLPNAESVKEVTSRITGKDYEVK
NVEKKERKRNPAAPFTTSSLQQEAARKLNFRTRKTMMVAQQLYEGISLGRQGTVGLITYM
RTDSKRISDSAKAEVTDFIESTYGKEFAAHDVKKLKNAQGAQDAHEAIRPTSALRTPDEM
AKYLDKDQLKLYSLIWSRLVASQMTPAILDTMKVTLDHNGVQFIANGSKVKFKGFMQVYV
EGHDDGKEEKENILPELEIGEMVQSVDIEPKQHFTQPPARFSEATLIRTLEENGVGRPST
YAPTLETIQRRYYVKLAQKRFEPTELGEIVNTLIEDFFPQIVDVHFTAEMEDNLDKVEEG
KEDWIKVVDHFYRPFEKELKTAEEKIEKIQIKDEPAGFDCELCGHPMVIKLGRYGKFYAC
SNFPDCRNTKPIVKEIGVECPICHKGQVVERKSKKNRIFYGCDRYPECEFTSWDKPIGRN
CPKCDHYLVEKKVKGGKQIVCPNGDYEEDVQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcctataaatatttggtgattgtggaatcaccagcgaaagcaaaaacgattgagaaa
tatcttggtcgaaattacaaagtggttgccagtgtaggacatattcgtgatttaccgaaa
agtaaaatgggaatcgatgttgaaaataattatgaaccacattatatttctattcgtgga
aaaggcgatgtcattaaaagtctacgctctgcagcaaaaaaagcacaaaaagtgtatctt
gcaagtgacccggatagagaaggggaagccattgcatggcatttagctcatttgttagga
ctagatttaaatgaaaaaaatcgagtggtgtttaatgaaattaccaaagatgctgtaaaa
gcagcctttaaagaaccgcgaacgattgatcttgatttagtggatgcacaacaagcgcga
cgtgttttagaccgtttagtggggtactcaattagcccaattttatggcgtaaagtcaaa
aaagggttgagtgcaggacgtgttcaatcggtcgctttaaaaattattattgatcgcgaa
aaagaaattcgtgaattcaaaccggaagaatattggagtattgatggcaattttaaaaaa
ggtcgtaaaaaattcaaggccaatttctggggaattgatggaaagaaaaagaaattgcca
aatgctgaaagtgtcaaagaagttactagccgtattacaggtaaagattatgaagtaaaa
aacgtcgagaaaaaagagcgtaaacgtaatccagcagctccgtttactacaagtagctta
caacaagaggcagcacgtaaattaaactttagaactcgtaaaacaatgatggttgcgcag
cagctttatgaaggaatttcgctaggtcgacaaggaactgtcggtttaattacgtatatg
cgtacagattcgaaacgtatttcagattcagcaaaagccgaagtaactgattttattgaa
tcaacttatggaaaagaatttgctgcacatgatgtcaaaaaattgaaaaatgcccaaggt
gcacaagatgcccatgaagcgattcgtccaacaagtgcattacgtacaccagatgaaatg
gcgaaatatctagacaaagatcaattaaaattatattctttaatctggtcacgtttggtt
gctagtcaaatgactcctgctattttagatacgatgaaagtgacattggatcataacggt
gtccaatttattgcgaatggttctaaagtgaagtttaaaggatttatgcaagtgtatgtt
gaaggccatgatgatgggaaagaagagaaagaaaatatcttacctgagttagaaattggc
gaaatggttcaatctgttgatattgaaccaaaacaacattttacacaaccacctgcacgt
tttagtgaagcaaccttaattcgcacattggaagaaaatggagttggtcgtccatcgaca
tatgcaccaacattagaaacaatccaacgtcgttattatgtgaagttagctcaaaaacgt
tttgaaccaaccgagttaggtgagattgttaatacgttgattgaagatttcttcccacaa
atcgttgatgttcattttacagctgaaatggaagacaatttagataaagtggaagaagga
aaagaggactggattaaggttgtcgatcatttctatcgcccatttgaaaaagagctaaaa
acagccgaagaaaaaatcgaaaaaattcaaatcaaagatgaaccagctggttttgattgc
gaattatgtggtcatccaatggttatcaaattaggacgttatgggaaattttatgcatgt
agtaacttcccagattgccggaatacaaaaccaatcgttaaagaaattggtgtagaatgt
ccaatttgtcataaaggacaagttgttgaaagaaaatctaagaaaaatcgcatcttctat
ggttgtgatcgttatcctgaatgtgaattcacttcttgggataagccaattggacgaaat
tgtccaaaatgtgatcactatctagtagagaaaaaagtcaaaggtggcaaacaaattgtg
tgtccgaatggtgactacgaagaggatgtacaaaaatag
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