Enterococcus saccharolyticus: ACMHDP_05030
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Entry
ACMHDP_05030 CDS
T11148
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
esy Enterococcus saccharolyticus
Pathway
esy02020
Two-component system
esy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
esy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACMHDP_05030 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACMHDP_05030 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esy03021
]
ACMHDP_05030 (rpoN)
Transcription machinery [BR:
esy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACMHDP_05030 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
XOE05572
LinkDB
All DBs
Position
complement(984352..985668)
Genome browser
AA seq
438 aa
AA seq
DB search
MKFEQQFSQQQKQTQKLAMTQKLQQSIQVLQFSTEELSNFIDNQALENPLLDVTQPNYTS
NYSKPRTSTGTEMNRLNQIPDTTISLFEHLIDQIHLNYRDTYLRTLVLYLVEYIDLNGYL
TISLDEAVANTGGTPIQLLDALTLIQQLEPAGVGARNLQECLMLQTERDNYAPEIAYLLL
EEYFIELVERKWDSIAKKLLISLADVQKVFDYIQTLTPAPGAIFGSTEGLYIIPDLTVKV
EEQQVTVFSNRSGMPEIKFQQNYFEQMKQSGDPDVLKYLKDKQQDFEWLKKTVEQRGDTI
FNVGKVIVERQQEFFLNKEHPIKPLILKDISEELAIHESTVSRAVNGKYLETDFGVFELK
HFFSQKLASDDGERSTNDVKHRLQALVDAENKAKPLSDQKLVDLLNEEGIDISRRTVAKY
RDLLKIPSSAKRKRYDET
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgagcaacagttttcacaacaacaaaaacaaacccaaaaactagcgatgacg
cagaaattgcagcaatcgattcaagttttacaattttcaacagaagaattatctaacttt
attgacaatcaagcattagaaaacccactattagatgtcacacaaccgaattatacatcg
aattattccaaaccgcgtacatccaccggcactgaaatgaatcgtttgaatcaaattccc
gatacaaccatctctttatttgaacatttgattgatcaaattcatttaaattatcgtgat
acatatttacggacacttgttctttatttagttgagtacattgatttgaatggttatctc
acgatttcgttagatgaagcagtggcgaatacaggtgggacacccattcaactactagat
gcgttaacgcttattcaacaattagaaccagcaggagtaggagcgcgcaatcttcaagaa
tgtttaatgttacaaacagagcgtgataactatgcaccagaaattgcatatctattattg
gaagaatattttattgaattagtcgagcgtaaatgggacagcattgctaaaaaattgttg
atttcattggctgacgttcaaaaagtgtttgattacattcagacgttaacgccagcacca
ggtgcaatttttggttcaacagaagggttgtatatcattcctgatttaaccgttaaagtt
gaagaacaacaagtgacagttttttctaaccgcagcgggatgcccgaaattaaatttcag
caaaattattttgaacaaatgaaacaaagtggagatcctgatgttttgaaatatctgaaa
gacaagcagcaagattttgaatggttgaaaaaaacagttgaacaacgtggcgataccatt
tttaatgtggggaaagtaattgttgaaagacaacaagaattctttttaaataaagaacat
ccgataaaaccattaattttaaaagatatttcagaagaattagccatccatgaatccacc
gttagccgcgcagtgaatggcaaatatttagaaacagacttcggtgtatttgaattaaaa
catttcttcagccaaaaattagcttctgatgatggggaacgctcgaccaatgatgtcaaa
catcgtttacaagcattagtggatgctgagaacaaagccaagccactttctgatcaaaaa
ttagtcgatctattgaacgaagaaggcattgatatttcacgaagaacggtcgcaaaatac
cgcgatttattaaaaattccatcttctgctaaacgtaaaagatacgatgagacataa
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