Enterococcus saccharolyticus: ACMHDP_05800
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Entry
ACMHDP_05800 CDS
T11148
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
esy Enterococcus saccharolyticus
Pathway
esy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMHDP_05800 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esy03021
]
ACMHDP_05800 (rho)
03019 Messenger RNA biogenesis [BR:
esy03019
]
ACMHDP_05800 (rho)
Transcription machinery [BR:
esy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACMHDP_05800 (rho)
Messenger RNA biogenesis [BR:
esy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACMHDP_05800 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
S1CSD-TOTE-2
DUF2508
Mor
Motif
Other DBs
NCBI-ProteinID:
XOE05712
LinkDB
All DBs
Position
complement(1129915..1131210)
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AA seq
431 aa
AA seq
DB search
MSDYLTMAELDHKTLKEIYTYAKEFKIPYYSQMNKKELSLAVIRAQAEKQGFFYMEGILD
IVGQEGYGFLRPINYGPSAEDIYISSSQIRRFGLRNGDKVAGKARPPKESERYYGLMHVE
SVNGKNPEEAKERPHFPALTPLYPETQIKLETTKGRLSTRMIDMFSPVGFGQRGLIVAPP
KAGKTSILKEIANGITENYPDVELIVLLIDERPEEVTDLERSVKGDVVSSTFDLQPSNHT
RVAELVLERAMRLVEDKRDVVILMDSITRLARAYNLVVPPSGRTLSGGIDPAALYKPKKF
FGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELQLSRNLAERRIFPAIDL
KKSSTRKEELLMSSEQLEETWRLRNHMTGDSLEYTDQFIQFLKKTKNNQEFLAAFHDVTF
NEKRVKRNVKR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactatttaacaatggcggagttagatcataaaacattaaaagaaatctatacg
tacgcaaaagaattcaaaattccttattatagtcaaatgaacaaaaaagaattatcctta
gcggttattcgtgcgcaagcggagaagcaaggctttttctacatggaaggaattctagat
attgttggtcaagaaggttatggctttttgcgaccaattaactatggtccaagtgccgaa
gatatttatatctctagctcacaaattcgtcgtttcggtttacgaaatggggacaaagtt
gcgggaaaagcaagaccaccaaaagaatctgaacgttattatggtttgatgcatgtagaa
agcgtcaatgggaaaaatcctgaagaagccaaagaacgtccgcattttccagcgcttacg
cctttgtacccagaaacacaaattaaattagaaacaactaaagggcgtttatcgacgcgt
atgattgatatgttttcaccagtcggttttgggcaacgcggactcattgtcgctccgcct
aaagcggggaaaaccagtattttaaaagaaattgcgaatgggattactgaaaattatccc
gatgtggaattaattgtactcttaattgacgaacgtccagaagaagtgacagacttagaa
cgcagtgtgaaaggtgatgtcgtttcttctacctttgatttgcaaccaagtaatcataca
cgtgtggcagaattagtcttagaacgtgcgatgcgtttagtagaagacaaacgtgatgtg
gttattttgatggatagcatcacacgtttagcacgtgcgtataatttagttgttccgcca
agtggccgtacgttaagtggtgggattgatccagctgcgttgtacaaaccaaaaaaattc
tttggtgcagctcgtaacattgaagaaggtggaagcttaactattttagcgactgcttta
gttgatacggggagccggatggacgatgtgatttacgaagagtttaaaggaacaggcaat
atggaactacaattgtcacgtaatctagccgaacgccgcattttccctgcgattgatttg
aagaaatcaagtacacgcaaagaagaattattaatgtctagcgaacaactagaagaaaca
tggcgattgcgcaatcatatgaccggagattccttggaatatacagatcaattcattcaa
ttcttaaagaaaaccaaaaacaatcaagaatttcttgcagcatttcatgatgtgacgttt
aatgaaaaaagagtcaaaagaaatgtgaaaagataa
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