Enterococcus saccharolyticus: ACMHDP_05880
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Entry
ACMHDP_05880 CDS
T11148
Symbol
rnjA
Name
(GenBank) ribonuclease J1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
esy Enterococcus saccharolyticus
Pathway
esy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMHDP_05880 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esy03019
]
ACMHDP_05880 (rnjA)
Messenger RNA biogenesis [BR:
esy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACMHDP_05880 (rnjA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
XOE05727
LinkDB
All DBs
Position
1147968..1149647
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AA seq
559 aa
AA seq
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MKVSLKNNETGVFGIGGLGEIGKNCYGVQFQDEIILIDAGIKFPEDELLGIDYVISDYSY
IVQNLQKVKGLIVTHGHEDHIGGIPYLLRQANIPIYAGPLALALITNKLDEHGLLRDAVL
HEIHEDTVIRFRKTSVSFFRTTHSIPDALGVVVKTPCGNIVATGDFKFDFTPVGEPANLH
KMAKIGEEGVLCLLSDSTNAEIPTFTKSEKTIGSSIIKIFEKIEGRIIFASFASNIFRLQ
QAADAAVATGRKIAVFGRSMENAIVNGQKLGYINVPKGTFVDASEINRLPANETMILCTG
SQGEPMAALSRIANGTHRQIHVHPDDTVIFSSSPIPGNTTSVNHLINLLLEAGAKVIHGK
LNNIHTSGHGGQEEQKLMLRLMKPKYFMPVHGEFRMLKIHTQLAQDTGVPKENCFIMENG
DMLALTPDTARLSGHFNAGDVYVDGSGIGDIGNVVLRDRRILSEEGLVLAVATVDIEKKE
ILAGPDILSRGFVYMRESGEMISEGQSILFHALREALSQPDCNEYKLREAMSAALQPFLF
EKTERHPMILSMIMTLDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatctcttaaaaacaacgagaccggcgttttcggtattggcggattaggagaa
atcggaaaaaactgttatggggtgcaatttcaagacgagattatcttgatcgatgcggga
atcaaattcccagaagatgagctccttggtattgactacgtgatttctgattacagctat
atcgtccaaaacttgcaaaaagtcaaagggttaatcgtcactcatggtcatgaagatcat
attggtggtatcccttacctattaagacaagcaaatattcctatttacgcaggtccgtta
gcgttggcattaattaccaacaagctagacgaacatggtttactacgtgatgctgtttta
cacgaaattcatgaagatacggtcatccgttttagaaaaacttcagtgagtttcttccgt
acaacacatagtattcccgatgcgctgggcgtagttgtcaaaacaccttgtggcaatatc
gttgcgacaggtgactttaaatttgattttacacctgttggcgaaccagccaacttgcat
aaaatggctaaaattggtgaagaaggtgttttgtgtttactatctgatagtaccaatgcc
gaaatcccaacgtttactaagtctgaaaaaacaattggttcttctattatcaagattttt
gaaaaaatcgaaggacgtattatttttgccagtttcgcttccaatatcttccgtttgcaa
caagcagcggatgcggcagttgcgacaggtcgaaagattgcagtttttggtcgcagtatg
gaaaatgcgattgtcaacggccaaaaattaggttatatcaatgtacctaaaggaactttt
gttgatgcaagtgaaatcaatcgcttgcctgcaaacgaaaccatgattttatgtacaggt
tcacaaggcgaaccaatggcagcattaagtcggattgccaatggaactcaccgtcaaatc
cacgtacatccggatgatacagtgattttttcaagctctcctattccaggaaatacaact
agcgtcaaccatctaatcaatttattattagaagctggtgcaaaagttattcacggaaaa
ttaaacaacatccacacttctggtcacggtggtcaagaagagcaaaaattaatgttacgt
ttaatgaaaccaaaatactttatgccggttcatggtgaattccgtatgttaaaaatccat
acgcaattagcccaagatactggtgtaccaaaagaaaattgttttatcatggaaaatggg
gatatgttagctttaacaccagacactgcccgtctttccggtcactttaatgcgggtgac
gtttatgttgatggtagtgggattggtgatattggcaatgtggtcttacgcgatcgccgt
atcctttcagaagaaggtttggttttagctgttgctactgttgatattgagaaaaaagaa
attttagcaggtccagatattttatctcgcggttttgtctatatgcgtgaatccggcgaa
atgattagcgaagggcaaagtattttattccatgccttgcgtgaagccttaagccaacca
gattgcaacgaatacaaattgcgtgaagcgatgtctgcagccttacaacctttcttattt
gaaaaaacagaacgtcatccaatgattttatcaatgattatgacattagacgaagaataa
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