Enterococcus saccharolyticus: ACMHDP_10035
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Entry
ACMHDP_10035 CDS
T11148
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
esy Enterococcus saccharolyticus
Pathway
esy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
esy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACMHDP_10035 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esy03021
]
ACMHDP_10035 (rpoB)
03400 DNA repair and recombination proteins [BR:
esy03400
]
ACMHDP_10035 (rpoB)
Enzymes [BR:
esy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACMHDP_10035 (rpoB)
Transcription machinery [BR:
esy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACMHDP_10035 (rpoB)
DNA repair and recombination proteins [BR:
esy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACMHDP_10035 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XOE03959
LinkDB
All DBs
Position
1919697..1923311
Genome browser
AA seq
1204 aa
AA seq
DB search
MAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIDDFNG
NLSLEFVDYELKTPKYTVEEARAHDANYSAPLHVTLRLTNRETGEIKAQEVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAKDIS
YVRIDRTRKIPLTVLVRALGFGSDDTIFDIFGDSESLRNTIEKDLHKNASDSRTEEGLKD
IYERLRPGEPKTADSSRNLLNARFFDPRRYDLAAVGRYKVNKKLDLKTRLLNLTLAETLV
DPETGEIIVEKGTALTHQVMDDVLGKHLDNGLNSVTYYPSEDGVVTDPMTVQVIKVFAPK
DPEREVNVIGNAYPDTEVRTVRPADIIASMSYFFNLMEGIGNVDDIDHLGNRRIRSVGEL
LQNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQTN
PLAELTVKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLASYA
KVNKYGFIETPYRRVDRESGKVTEHIDYLTADIEDHYVVAQANSPLNEDGSFKNDVVMAR
ATSENLEVSIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPQA
PWVGTGMEYKSAHDSGAALLCKHDGVVEYVDASEVRVRRDNGALDTYTVTKFRRSNSGTS
YNQRPLVSLGEKVDAGDILADGPSMESGEMALGQNVLVAFMTWEGYNYEDAVIMSRRLVK
DDVYTSVHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVQDGDLLV
GKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDELSP
GVNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLGVP
SRMNIGQVLELHLGMAARQLGIHVATPVFDGASDDDVWETVREAGMARDAKTVLYDGRTG
EPFDGRISVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMR
VLDIDEQEIELRDMDDEDDDLITVDALTKFAEQQNAREAEKNAQSGAEVKPADEENSPVD
APLD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttggctggacacgtagtaaaatacggaaagcatcgcgaacgtagaagtttcgcacgtatc
agtgaagtattggaattaccgaatttgattgaaattcaaacagattcttaccaatggttc
ttagatgaaggactaagagaaatgtttgaagacatcttgccaatcgatgactttaatgga
aacctgtccttggaatttgtagattatgagttgaaaacaccgaagtatacggtagaagaa
gcacgtgcacatgatgcaaactattctgcaccattacacgtaaccttgcgtttgacaaac
cgcgaaacaggcgaaatcaaagcgcaagaagtattctttggcgatttcccattaatgaca
gaacaaggaacattcattattaacggagcagaacgtgttattgtatcccaattagtacgt
tcacctggtgtgtacttccacggaaaagtagacaagaacggtaaagaaggttttggttca
actgttatccctaaccgtggcgcatggttagaaatggaaacagatgcgaaagatatttct
tatgtacgtatcgaccgcacacgtaaaattccattaacagtattggttcgtgccttaggt
tttggttctgacgatacgatttttgatatttttggtgatagcgaatcactacgtaacaca
attgaaaaagacttgcacaaaaacgcaagcgattctcgtacggaagaaggcttaaaagat
atttatgagcgtcttcgtccaggcgagccaaaaacagcagacagttctcgtaacttgtta
aatgcacgtttctttgacccacgtcgttacgatttagcagcggttggtcgttataaagta
aacaaaaaactagacttgaaaacacgcttattaaacttaacattagctgaaacattggtt
gatcctgaaacaggtgaaatcattgttgaaaaaggaactgcgttaacacaccaagtgatg
gatgatgttttaggtaaacacctagacaacggcttaaactctgtaacttattacccatca
gaagacggtgtcgttaccgatccaatgactgttcaagttatcaaagtatttgcaccaaaa
gatccagaacgtgaagtaaatgtgattggtaatgcgtatccagatacagaagtacgtaca
gtacgtccagcggatatcattgcttcaatgagttatttcttcaacttaatggaaggaatc
ggcaatgtcgatgatatcgaccatttaggaaatcgtcgtattcgttctgttggtgaatta
ttacaaaaccaattccgtatcggtttagcacgtatggaacgtgttgtacgtgaacgtatg
tctattcaagatactgaaacattaacaccacaacaattaattaacatccgtccagttgtt
gcaagtatcaaagaattctttggttcttcacagttgtcacagttcatggaccaaacaaac
ccattggctgagttaacagttaaacgtcgtctatcagccttagggcctggtggtttgact
cgtgaccgtgccggttatgaagttcgagacgttcactattctcactatggtcgtatgtgt
ccgattgaaacgcctgaaggtccaaacatcggtttgattaacagtttggcttcttatgcg
aaagtgaacaaatacggatttatcgaaacaccgtaccgtcgtgttgatcgcgaatcaggt
aaagtaacagaacacattgattatttaacagcggatatcgaggaccactatgtagtagcc
caagcaaatagcccattaaatgaagatggttcatttaaaaacgatgttgttatggcgcgt
gcgacaagtgaaaacttagaagtatctattgataaagttgattacatggacgtatctcct
aaacaagtagttgcggtagcgacagcatgtattcctttcttggaaaacgatgactccaac
cgtgccttgatgggtgccaacatgcagcgtcaagcagtaccattgattaaccctcaagct
ccttgggtaggaactggtatggaatacaaatctgctcatgactcaggtgcagcattacta
tgtaaacatgatggtgttgttgaatacgtggatgcgtcagaagtacgcgttcgtcgtgac
aatggtgcattagatacttacacagtaacgaaatttcgtcgttcaaactctggaacaagc
tacaaccaacgcccattagtttcgttaggcgaaaaagttgatgcaggcgatatcttagct
gacggaccatctatggaaagtggcgaaatggcattaggtcaaaacgtcttagttgccttc
atgacttgggaaggttacaactatgaggatgctgttatcatgagccgtcgtttagtaaaa
gacgatgtgtatacttctgtgcatattgaagaatatgaatcagaagctcgtgatacaaaa
ttaggccctgaagaaattacacgcgaaattcctaacgttggggaagacgcattaaaagac
ttagacgaaatgggtattatccgtatcggtgccgaagtacaagatggcgacttattagta
ggtaaagtcactcctaaaggggtaaccgaattatctgcagaagaacgtctattgcacgca
atcttcggtgaaaaagcacgtgaagtacgtgatacatcattacgtgttcctcacggcggt
ggcggtatcgttcacgatgttaaaatctttacccgtgaagcaggcgacgaattatctcca
ggtgtgaacatgttagttcgtgtttatatcgtgcaaaaacgtaagattcatgaaggagat
aaaatggcgggacgtcatggtaacaaaggggttgtctctcgcattatgccagaagaagac
atgccattcttaccagacggcacaccagttgatatcatgttgaacccactaggggtacca
tctcgtatgaacatcggacaagtattggaattacacttagggatggctgcacgtcagtta
ggcatccacgtagctacaccagtatttgatggtgcatcagatgatgacgtatgggaaaca
gttcgcgaagcgggcatggcgcgcgatgcgaaaactgttctttatgacggacgtacgggt
gaaccattcgatggtcgtatctctgttggggtaatgtacatgattaaacttgcccacatg
gttgatgataaacttcatgctcgttcaattggaccttactcattggttacacaacaacct
cttggtggtaaagctcaattcggtggacaacgtttcggagagatggaagtttgggcgctg
gaagcttatggtgcagcgtataccttacaagaaatcttgacatacaaatcagatgacgtt
gttggtcgtgtgaaaacatacgaagctattgttaaaggtgaaccaattccaaaaccaggt
gtaccggaatcattccgcgtattagtaaaagaattacaatcacttggtttagacatgcgt
gtattagatatcgatgaacaagaaatcgaattacgcgacatggatgatgaagatgatgat
ttaatcacagttgatgcgttaacgaaatttgcggaacaacaaaatgcccgtgaagctgag
aaaaacgcacaaagcggagcagaagtaaaacctgctgatgaagaaaattcaccagtagat
gctccattagattag
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integrated database retrieval system
