KEGG   Escherichia sp. E4742: FEM44_02400
Entry
FEM44_02400       CDS       T06276                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
esz  Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:esz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:esz03016]
    FEM44_02400 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:esz02048]
    FEM44_02400 (vapC)
Transfer RNA biogenesis [BR:esz03016]
 Prokaryotic type
  tRNA degradation factors
   FEM44_02400 (vapC)
Prokaryotic defense system [BR:esz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    FEM44_02400 (vapC)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: QCT86162
LinkDB
Position
complement(492859..493257)
AA seq 132 aa
MLKFMLDTNICIFTIKNKPVHVRDRFNLNSGRMCISSVTLMELIYGAEKSQMPERNLAVI
EGFVSRLEVLDYDSAAATHTGQIRAELAWQGRPVGPFDQMIAGHARSRGLIVVTNNTREF
ERVAGIRLEDWS
NT seq 399 nt   +upstreamnt  +downstreamnt
atgctgaaattcatgctggataccaatatctgtattttcactattaagaataaaccagta
catgtcagggatcgctttaacctgaattctggccggatgtgtataagttctgtaacattg
atggagcttatctatggggcagaaaaaagtcagatgccagaacgcaatttagcggtgatt
gaaggtttcgtatctcgtttggaagtgcttgattatgatagtgctgctgcgacgcatact
gggcaaatcagagccgagcttgcctggcagggaaggcctgttggaccttttgaccagatg
atagcgggacatgctcgcagtcgcggtttgattgtggttaccaacaatacccgagagttt
gagcgagtagcgggaatcagactagaagactggagctaa

DBGET integrated database retrieval system