Escherichia sp. E4742: FEM44_04030
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Entry
FEM44_04030 CDS
T06276
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
esz
Escherichia sp. E4742
Pathway
esz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FEM44_04030 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esz03400
]
FEM44_04030 (recC)
Enzymes [BR:
esz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FEM44_04030 (recC)
DNA repair and recombination proteins [BR:
esz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEM44_04030 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QCT86460
LinkDB
All DBs
Position
complement(841922..845290)
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI
DFPLPASFIWDMFVRVLPEIPKESAFNKRSMSWKLMTLLPQLLDREDFTLLRHYLTDDSD
KRKLFQLSSKAADLFDQYLVYRPDWLAQWEAGHLVEGLGEAQAWQAPLWKALVEYTHELG
QPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLF
TNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLL
ASWGKLGRDYIYLLSDLENSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNLEEFSR
SDNKRPLDPQDGSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFL
PDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEAL
ISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHL
TCHHTRMPFDPQNYQPGNLQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRF
WAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRR
FRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQ
SDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYL
SQLIEGYREGMSAPLLVLPESGGAWLKTCYDAENDAMLDDESTLQKARSKFLQAYESNMM
VRGEGDDIWYQRLWRQLTPETMEAIVKQSQRFLLPLFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgctaagggtctaccattccaatcgtctggacgtgctggaagcgttgatggagtttatc
gtcgaacgcgaacggctggacgatcctttcgaaccagaaatgattctggtgcaaagtacc
ggtatggcacagtggctgcaaatgacgctgtcgcagaagtttggcattgcggcaaacatt
gattttccgctgccggcgagctttatctgggatatgttcgtccgcgtattgccggagatc
cccaaagagagcgcctttaacaagcggagtatgagctggaaactgatgactctgctgccg
caactgctggatcgcgaagattttaccctgttgcgtcattacctgactgacgatagcgac
aagcgaaaactgttccagctttcctcaaaagcggcggacctgtttgatcagtatctggtc
tatcgcccggactggctggcacagtgggaagcgggacatctggttgaagggctgggagaa
gcgcaggcctggcaagcgccgttgtggaaggcgctggtggaatatacccatgaactcggg
caaccgcgctggcaccgtgccaatctctatcaacgctttatcgaaacactggagtctgcg
acgacctgcccacccggcttaccttcgcgcgtctttatatgcggtatttccgcgttaccg
ccagtttatttacaggcgctgcaggcgctgggtaaacatattgaaatccatctcctgttt
accaacccttgccgttattactggggcgatattaaagatcctgcttatctggcgaaactg
ctgacccgccagcgtcgacacagttttgaagatcgcgaattgcctctatttcgcgatagc
gaaaatgcgggacagctctttaacagcgacggtgaacaggatgtcggcaacccgctactg
gcctcctggggcaagttggggcgcgactatatctatctcctttccgatctggagaacagt
caggagctggacgcctttgtcgatgtcacgccagacaatctgctgcataacatacagtcc
gacattctggaactggaaaaccgcgccgttgcgggcgtgaacctcgaagagttttcccgt
agtgataacaaacgcccgcttgatccgcaggatggcagcattacattccatgtttgccac
agcccgcagcgtgaagttgaagttttgcacgatcgcctgctggcgatgctggaagaagat
ccgacactcactccgcgcgacatcatcgtgatggtggccgacatcgacagctacagtccg
tttattcaggccgtgtttggcagtgcgccagcggatcggtatctgccatatgccatttct
gaccgtcgggcgcggcagtctcatcctgtactggaagcgtttatcagcctgttatcgttg
ccggacagccgctttgtatcggaggatgtgctggcattactggatgtgccggtgctggcg
gcgcggtttgacattaccgaagaagggctgcgttacttgcgccagtgggtcaacgaatcc
ggcattcgttggggcatagatgacgataacgttcgtgagctggaactccccgctaccgga
caacacacctggcgatttggcctgacgcgtatgttactaggctacgcgatggagagtgct
cagggggaatggcaatcggttctaccttacgatgaatcgagcggcctgattgcagagctg
gtaggacacctggcgtcactgctaatgcagctaaacatctggcgtcgcgggctggcgcag
gagcgcccgcttgaggagtggctgccggtttgccgcgatatgctcaacgccttcttcctg
ccggatgcggaaaccgaagcggcaatgacgcttattgagcaacaatggcaggcgattatc
gctgaaggtttaggtgcgcagtatggcgacgcggtgccgctatcgctgttacgtgatgaa
ctggcacaacgcctggatcaagaacgtatcagccagcgttttctcgcggggccagttaac
atttgtactctgatgccgatgcgttctatcccattcaaagtggtttgcctgctgggaatg
aacgatggtgtttacccgcgccagcttgcgccattgggctttgacctgatgagccagaaa
ccgaagcgcggtgaccgtagccgtcgcgatgacgaccgctatctgttcctggaagcgtta
atttccgcgcaacaaaaactctatatcagctatatcggccgctctattcaggataacagc
gaacgattcccgtcagttctggtgcaggaactgatcgactacatcgggcaaagccattat
ctaccgggcgatgaagcgcttaactgtgatgaaagcgaggcaagggtaaaagcgcatctt
acttgccaccatacccggatgccgtttgacccgcaaaactaccagcccggtaacttacaa
agctatgcgcgcgagtggctacccgcggccagccaggcaggtaaggcacattctgaattt
gttcagccgctaccgtttaccttgccggaaaccgtgccgttggaaacgctacaacgattc
tgggcgcatccggtgcgggcgtttttccagatgcgtttgcaagtgaacttccgtaccgaa
gacagcgaaattcccgacaccgaaccttttattcttgaagggcttagtcgttatcaaatc
aaccagcagttattaaatgcactggtcgagcaggatgatgccgaacgcttgttccgccga
ttccgggcggcaggggatttgccgtatggcgcctttggtgaaattttctgggaaacgcag
tgccaggagatgcagcagcttgccgacagagttattgcctgtcgtcagccgggccagagc
atggaaatcgatctcgcctgcaacggcgtgcagataactggctggttgccgcaggtccag
tcggatggcctgttgcgctggcgcccatctttattaagtgtggcgcagggaatgcaactt
tggctggaacaccttgtctactgtgccagcggtggtaatggtgaaagtcgcctttttcta
cgcaaagacggcgagtggcgttttccgccgcttgctgccgaacaggctttacattacctc
tcacagctgattgaagggtatcgtgaaggtatgtccgcgccattgctggtgttacctgaa
agcggcggcgcgtggttaaaaacctgttatgacgcagaaaacgatgccatgctggacgac
gaatccacgttgcaaaaagctcgttcgaaattccttcaggcttacgaaagcaacatgatg
gtgcgtggcgaaggtgatgatatctggtatcaacggctatggcggcaattaacgccagag
acaatggaagccatcgttaaacaatcgcaacgtttcctgttaccgctgtttcgctttaat
cagtcatga
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integrated database retrieval system
