KEGG   Escherichia sp. E4742: FEM44_05745
Entry
FEM44_05745       CDS       T06276                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
esz  Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:esz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:esz02044]
    FEM44_05745 (tssC)
Secretion system [BR:esz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FEM44_05745 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 APG6 PaaA_PaaC
Other DBs
NCBI-ProteinID: QCT86753
LinkDB
Position
complement(1190336..1191883)
AA seq 515 aa
MLMSVNNENATAGESVVLERPVASGVYASLFEKINLSPVSELSALDIWQDAQAMSDATAD
ERLTAGMQVFLECLTKSGSKVEKLDKNLIDHHIAELDYQISRQLDAVMHHEAFQAVESLW
RGVKSLVDKTDFRQNVKVELLDISKEDLRQDFEDSPEIIQSGLYKHTYIDEYDTPGGEPI
AALISSYEFDASAQDVALMRNLSKVSAAAHMPFIGSAGPKFFLKESMEEVAAIKDIGNYF
DRAEYIKWKSFRDTDDSRYMGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWT
NASFAFAANMVKSFINNGWCVQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETR
EFEFANLGFIPLSYYKNRDYACFFSANSTQKPALYDTADATANSRINARLPYIFLLSRIA
HYLKLIQRENIGTTKDRRLLELELNTWVRGLVTEMTDPGDDLQASHPLRDAKVLVEDIGD
NPGFFRVKLFAIPHFQVEGMDINLSLVSQMPKAKS
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgttgatgtctgtaaataatgagaatgccactgctggcgagagtgtggtccttgaacgt
cctgtggcaagtggagtttatgcgtccctgtttgaaaaaattaatctgagcccagtctca
gagttgagtgctctggatatctggcaggatgcacaggcgatgtcggatgcgactgcggat
gaacgtttaactgccgggatgcaagtgttcctggaatgtctgactaaatccggatctaaa
gttgaaaagctcgacaaaaatttgattgaccaccatatcgctgaactggattaccagata
agtcgtcaacttgatgcagttatgcatcacgaggcctttcaggcggtagaaagcctgtgg
cggggcgtgaaatcgttggttgataaaactgatttccgccagaacgtgaaagttgaactg
ctggatatctctaaggaagacctgcgccaggattttgaagatagtccggaaattatccag
agtggtttgtacaaacacacatacatcgatgagtatgacactccgggcggcgagccgatt
gccgcgctgatttcctcttacgagtttgatgcttctgcgcaggacgtggcgctgatgcgt
aatttgtcaaaagtgtctgctgcggcacatatgccctttatcggttctgcggggccgaaa
tttttcctgaaagagtcaatggaagaggtcgcggccatcaaagatattggtaactacttt
gaccgcgccgagtacattaaatggaaaagtttcagggatacggacgactctcgatacatg
gggctggtcatgcctcgcgtgctgggccgtttgccgtatggcccggacacagtaccggta
cgtagttttaactatgttgaagaagtgaaaggcccggatcacgataaatacctgtggacc
aatgcctccttcgcttttgcggccaacatggtgaaaagcttcatcaacaacggctggtgc
gtgcaaatccgtggtccacaggccggtggtgcagtacaggacttgcccattcatctgtat
gatctcggtacgggtaatcaggtaaaaattccgtcagaggtgatgatcccggaaacccgc
gaatttgagttcgcaaatcttggatttattcccctgtcgtactacaaaaaccgcgattat
gcctgtttcttctcggcgaactccacgcaaaaacctgcgctctacgacactgctgatgcc
actgcaaatagccgcatcaatgcgcgtttgccgtacatcttcctgctgtcgcgaatcgct
cattatctgaagctgattcaacgggaaaacattggtacaaccaaggatcgtcgtctgctg
gaactggagcttaatacctgggttcgtggtcttgtgacagaaatgaccgatccgggcgat
gacttgcaggcttctcacccgctgcgtgacgcgaaagtgctggtggaagatatcggggat
aacccaggcttcttccgcgtgaaactctttgctatcccccacttccaggtggaagggatg
gacatcaacctatcactagtttcccagatgccaaaagccaaatcgtaa

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