Escherichia sp. E4742: FEM44_05890
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Entry
FEM44_05890 CDS
T06276
Name
(GenBank) DUF4092 domain-containing protein
KO
K10939
accessory colonization factor AcfD
Organism
esz
Escherichia sp. E4742
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
TonB_N
Motif
Other DBs
NCBI-ProteinID:
QCT86779
LinkDB
All DBs
Position
complement(1221087..1225637)
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AA seq
1516 aa
AA seq
DB search
MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPTPEPTP
EPEPTPDPTPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFTPGDKVT
CVAGNNTTIATFDTQSEAAPGLRAVEKVSFSLEDAQELAGSDDKKSNALSLVTSMNSCPA
DTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPV
TTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGNGVVGVNYYTNSGRGVTGE
NGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSQAGKNDE
REVPDVVRKVFAEYPNVINEIINLSLSNGEALSEGDQTFERKNEFLEQLKSGQAKEIDTA
ICKSLGGCNSQRWFSLTARNVNDGQIQGVINKLWGVDTNYQSVSKFHVFHDSTNFYGSTG
NARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVKPENVTRDT
ATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWAGGVNDKGECTLSGDSDDMKHF
MQNVLRYLSNDIWQPNTKSTMTVGTNLENVYFKRHGQVTGSSAPFGFHPDFAGISVKHLT
SYGDLNPEEVPLLILNGFEYVTQWSGDPYAVPLRADTSKPKLTQQDVTDLIAYMNKGGSV
LIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNTDPQGYPDRVRQLNEKGMWVYER
YPLVEGELPYTIDEKTKEVIWKYQIDNKPDKKPKLEVASWQEEVDGEQVTQYAFIDVAKH
PTDESLKAAKDKIFAAFPGLEECKDPDYHYEVNCLEYRPGTDVPVTGGMYVPRYTQLNLS
ADTAKAMVQAADLGTNIQRLYQHELYFRTNGSKGERLSSVDLERLYQNMSVWLWNDIEYR
YEDNKEDELGFKTFTEFLNCYANNAYAGGTQCSDELKKSLVDSKMIYGESSGKAGMMNPS
YPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQEVTETISLYSDPTKWFAGNM
QSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYDLKANGE
VKFTVPYGGLIYIKGDSKEVQSADFTFTGVVKAPFYKDGKWQHDLNSPAPLGELESASFV
YTTPKNNLNASNYTGGLEQFAKDLDTFASSMNDFYGRNDEDGKHRMFTFKNLPGHKHRFA
NDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVA
NNVLALYMQDRYLGKMNRVADDITVAPEYLNESNGQAWARGGAGDRLLMYAQLKEWAEKN
FDIKNWYPEGTLPKFYSDREGMKGWNLFQLMHRKARGDDVGNDKFGNRNYCAESNGNAAD
KLMLCASWVAQTDLSAFFKKWNPGANAYQLPGVSEMNFEGGVSQSAYETLAALGLPKPQQ
GPETINTVTEHKMSAE
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatttaaatataaaaaatcgcttttagcggctattttaagcgcaaccctg
ttagccggttgtgatggcggtggttcaggatcgtcctccgatactccgcctgtagattct
ggaactgggtctttgccggaagtgaaacccgatccaacgccaaccccggagccgacgccg
gagcctgaacctactccggacccgacacctgatccagagccaacaccagaaccggagcca
gaacctgttcctacgaaaacaggttacctgaccctgggcggaagccagcgggtaactggt
gctacctgtaatggtgaatccagcgacggctttacctttacgccaggcgacaaagtcacc
tgtgtggcagggaacaacacgacaattgctaccttcgacactcagtcagaagcagcgcct
ggcctgcgtgcggttgaaaaagtgtcatttagccttgaggatgcacaagaactggcgggc
tccgacgacaagaaaagcaatgcgctctcgctggtaacctccatgaacagttgtccggcg
gatacagaacaggtttgcctgacgttctcctcggtgatcgagagtaaacgctttgactcg
ctgtataagcaaatcgatctggcaccggaagagttcaaaaagctggtcaatgaagaggtg
gaaaacaatgctgcgaccgataaggcgccatccactcatacttcaccggtcgtgccagtc
accacgccgggaacaaaaccggatctgaacgcttccttcgtgtcggctaacgcggaacag
ttttatcagtatcaacctacggaaatcattctctccgaaggtcgtctggtagatagccag
gggaatggcgtggttggcgtcaactactacaccaattctggccgtggtgtaaccggagaa
aacggcgagttttcctttagctggggggaaaccatctcctttggcatcgacacctttgaa
cttggctcagtgcgcggtaacaagtcgactattgcactgacggaactgggcgatgaagtt
cgcggcgcgaatatcgatcaacttattcatcgttactcccaggccggaaaaaatgatgag
cgtgaagtgccggacgtagtgcgcaaggtctttgctgaatatcccaacgtgatcaacgag
attatcaatctctcgttatccaatggtgaggcgttgagcgaaggcgatcaaacctttgag
cggaaaaacgaatttcttgagcagcttaaatccgggcaggctaaagagattgatacagca
atttgtaaatccctcgggggctgcaactctcaacgttggttctcgctgacggcacgcaat
gttaatgacggccagattcagggcgttatcaacaagctgtggggcgtggatacgaactac
cagtctgtcagcaagttccatgtattccatgactccaccaacttctatggcagtaccggt
aatgcccgcggtcaggcggtggtgaatatctccaacgcggccttcccgattctgatggcg
cgtaatgataaaaactactggctggccttcggcgaaaaacgcgcctgggataaaaatgag
ttggcgtacattacggaagcgccttccattgttaagccggaaaacgttacgcgcgatacc
gcgaccttcaacctgccgtttatttcgctggggcaagtcggcgatggcaagctgatggtt
atcggtaacccgcactacaacagcattttgcgttgcccgaacggttacagctgggccggt
ggtgttaatgataaaggtgagtgcacactcagcggtgattcagatgacatgaagcacttc
atgcagaacgtactgcgctacctgtcaaacgacatctggcagccgaataccaagagcaca
atgaccgtagggacgaacctggaaaacgtttatttcaaacgtcatggtcaggtcactggg
agcagtgctccatttggcttccatccggatttcgcaggtatttctgttaaacatttgacc
agctatggcgatctgaatccggaagaagttccgttgctgatcctcaacggctttgaatat
gtgactcagtggtctggtgatccctatgcagtgcctctacgtgcagataccagcaaaccg
aagctgactcagcaggatgtgaccgatttgatcgcctatatgaacaaaggcggttcggtg
ctgatcatggaaaacgtgatgagcaatcttaaggaagagagcgcgtctggctttgtgcgc
ctgttggatgccgcaggcctgtcgatggcactgaacaaatcggtggtgaataccgatccg
cagggttatccagaccgtgtgcgccagttgaatgaaaaagggatgtgggtctatgaacgt
tatccgctggtagaaggtgaactgccgtacaccattgatgaaaaaacgaaagaagttatc
tggaaatatcagattgataacaaaccagataagaaaccgaaactggaagttgccagctgg
caagaagaggttgatggtgaacaagtaactcaatacgcgtttattgatgttgctaaacat
ccaactgatgagtctctgaaagccgcaaaagataagatctttgcagcgttcccggggctg
gaagagtgtaaggatcctgactaccactacgaggtcaactgtctggaataccgtcctggc
actgacgttcctgtaaccgggggcatgtatgttccgcgctatacgcaactgaatctcagc
gccgacactgcgaaagcgatggtgcaggctgcggatttaggcaccaacattcagcgcctg
tatcagcacgagctttacttccgtaccaatggtagcaaaggtgagcgtctgagcagcgtc
gatctggaacgtctgtaccagaacatgtcggtctggctgtggaacgatattgaataccgc
tatgaagacaacaaggaagacgagctgggctttaaaacgttcaccgagttcctgaactgc
tacgccaacaatgcctatgctggcggcacgcagtgttctgatgagctgaaaaaatcgctg
gtcgatagcaagatgatctacggtgaaagtagcggcaaagcgggcatgatgaacccgagc
tatccgctcaactatatggaaaaaccgctgacgcgtctgatgctggggcgttcctggtgg
gatctgaacatcaaagttgatgtcgagaagtatccgggggcggtatcggaagaggggcag
gaggttactgaaaccatcagcctgtactcggatccgaccaaatggtttgcgggtaacatg
cagtctactggtctgtgggctccggctcagaaagaggtcaccattaagtccaatgcgaac
gttcctgtgactgtcaccgtggcactggccgacgacctgaccggacgtgagaagcatgaa
gttgctctgaaccgtccgccaagagtgactaaaacctatgatctgaaagccaatggtgaa
gtgaagtttacggttccttacggcggtctgatttacatcaagggcgacagcaaagaggtg
caatcagctgacttcacctttaccggtgtagtaaaagcgccgttctataaagatggtaag
tggcaacacgatctgaactcccctgccccgctgggcgaactggagtctgcgtcgttcgtc
tataccacaccgaagaacaacctgaatgccagcaattacactggcggactggagcaattc
gctaaagatctggatacctttgccagctcgatgaatgacttctacggtcgcaatgatgaa
gacggtaagcaccggatgtttacctttaaaaacttgccgggtcacaaacaccgtttcgcc
aacgatgtgcagatctccattggtgatgcgcactctggttatccggtaatgaacagcagc
ttctcgacgaacagcaccacgctgccgacgacgccgctgaacgactggctgatctggcac
gaagtagggcacaatgctgcagaaacgccgctgactgtaccgggcgcaactgaagtagcg
aacaacgtgctggcgctgtacatgcaggatcgctatctcggcaagatgaaccgtgtcgct
gacgatattaccgttgcgccggaatatctgaacgagagcaatggtcaggcatgggcgcgc
ggcggtgcgggtgaccgtctgctgatgtacgcacagctgaaggagtgggcagagaaaaac
tttgatatcaagaactggtatccagaaggcactctgcctaagttctacagcgatcgtgaa
gggatgaaaggctggaacctgttccagttgatgcatcgtaaagcacgcggcgatgatgtt
ggcaatgacaaatttggcaacagaaattactgtgccgaatccaacggtaacgctgccgac
aagctgatgctgtgtgcatcctgggtcgctcagacggacctttccgcattctttaagaaa
tggaatccgggcgcgaatgcttaccagctgccgggggtgagcgagatgaacttcgagggc
ggtgtgagccagtcggcttacgagacgctggcggcgcttggtctgccgaaaccgcagcaa
ggaccggaaaccattaatacggttaccgagcataagatgtctgccgagtaa
DBGET
integrated database retrieval system
