Escherichia sp. E4742: FEM44_07255
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Entry
FEM44_07255 CDS
T06276
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
esz
Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esz03019
]
FEM44_07255 (csrD)
Messenger RNA biogenesis [BR:
esz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FEM44_07255 (csrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
QCT87034
LinkDB
All DBs
Position
complement(1506260..1508200)
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AA seq
646 aa
AA seq
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MRLTTKFSAFVTLLTGLTIFVTLMGCSLSFYNAIQYKFSHRVQAVATAIDTHLVSSDFSS
LRPQISELMMSADIVRVDLLHNNKQVYTLSRQGSYRPVGTSDLFRELTVPLVKHPGMSLH
LVYQDPMGNYFHSLMTTAPLTGAIGFIIIMLFLAVRWLQRQLAGQELLETRSARILNGER
GPNVLGSIYEWPPGTSSALDMLLSEIQNAREQHSRLDTLIRSYAAQDIKTGLNNRLFFDN
QLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHSQAEEQLFTLTNLLSTFMMRYPGAL
LARYHRSDFAALLPHRTLKEAESIAGQLIKAVDTLPSNKMLDREDMIHIGICAWRSGQET
EQVMDHAESATRNAGLQGGNSWAIYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TREGQVHHREIMCRIFDGNEEVSSAEYMPMVLQFGLSEEYDRLQISRLIPLLRYWPQENL
AIQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIIELAEADVGQHIGRLQPVIRLVNALG
VRVAVNQAGLTLVSTSWIKELNVELLKLHPGLVRNIEKRTENQLLVQSMVEACSGTNTQV
YATGVRSRSEWQTLIQRGVLGGQGDFFASSQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagattaacgacgaaattttcggcctttgtcacgctgctcaccgggttaacgatcttt
gtgactctgatgggctgctcgttaagtttctataacgcgattcagtataagtttagccat
cgcgttcaggcggtggcgacggcgatcgatacgcatctggtgtcgtctgatttcagctcg
ctgaggccacaaatcagtgaactgatgatgtcagcagatatcgttcgcgtggacctgtta
cacaataacaaacaggtttataccctttcccgccaggggagttaccgccctgttggcacc
agcgatctgtttcgcgaactgaccgttccgttagttaaacatccgggaatgtcgctacat
ctggtttatcaggacccgatgggaaactattttcactcgctgatgaccaccgcgccgctc
actggggcaattggttttatcattattatgctcttccttgcagtacgctggttgcagcgg
caacttgccgggcaagaactactggaaactcgctcggcgcgtatcttaaacggggagcgt
gggccgaatgtgcttggctccatctatgaatggccaccagggaccagcagtgcgctggat
atgctgctttcagaaattcagaatgcgcgtgaacagcacagccgtcttgatacgctgatt
cgctcttacgccgcacaagacattaaaaccggcctcaataaccgtctctttttcgacaac
cagttggctacattactggaagatcaagagaaggtagggactcacgggatcgtgatgatg
atccgtctacctgatttcaatatgttgagcgacacgtggggacacagccaggccgaagaa
cagctcttcactctgacgaatctgctgtcgacatttatgatgcgctatccaggcgcactg
ctggcgcgctatcaccgtagcgattttgccgcgctgttgccgcatcggactttaaaagag
gcggagagcattgccgggcagttgatcaaagcggttgataccttaccgagtaataaaatg
ctcgatcgtgaagatatgattcatatcggcatctgtgcctggcgtagcggccaggaaaca
gaacaagtgatggaccatgccgaatccgccacgcgtaatgcgggattacagggtggtaat
agctgggcgatttacgatgactcattaccagaaaaagggcgcggcaacgttcgctggcgt
acgctaatcgaacaaatgttgagtcgtggcgggcccaggctttatcaaaaacctgcggtc
acccgggaggggcaggttcatcatcgcgaaattatgtgtcgcatctttgatggtaatgaa
gaggtaagctcggcggaatatatgccgatggtgttgcagtttggtttatcggaagagtat
gaccgcctgcaaatcagtcgtctcatcccgctgttacgctattggccgcaagaaaatctg
gcgattcaggttaccgttgagtcgttgatccgcccgcgtttccagcgttggctgcgcgat
acgttgatgcagtgtgaaaaatcgcaacgaaaacgcataattattgaacttgcagaggct
gatgtgggtcaacatatcggtcgcttgcaacctgtcattcgtttggtgaatgctttaggg
gttcgagttgccgtgaaccaggctggattgacgctggtaagtaccagttggatcaaagaa
cttaatgtcgaattactcaagcttcatccggggctggtaagaaatattgagaagcgaacg
gaaaaccaattgttggttcagagcatggtagaagcctgttccgggaccaacacccaggtt
tacgcgacaggcgtacgttcgcgaagcgagtggcagaccctgattcagcgcggggttttg
ggtggccagggggattttttcgcgtcctcacagccacttgatactaacgtgaaaaaatat
tcacaaagatactcggtttaa
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