Escherichia sp. E4742: FEM44_09605
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Entry
FEM44_09605 CDS
T06276
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
esz
Escherichia sp. E4742
Pathway
esz03420
Nucleotide excision repair
esz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FEM44_09605 (uvrD)
03430 Mismatch repair
FEM44_09605 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esz03400
]
FEM44_09605 (uvrD)
Enzymes [BR:
esz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FEM44_09605 (uvrD)
DNA repair and recombination proteins [BR:
esz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FEM44_09605 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FEM44_09605 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCT87460
LinkDB
All DBs
Position
complement(1976838..1979000)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLESLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgaaagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaatcttctggtgctggcgggcgcgggcagtggtaagacgcgcgttctggtg
catcgtatcgcctggctgatgagcgtggaaaactgctcgccgtactcgattatggcggta
acgtttaccaacaaagcggcggcggagatgcgccatcgtatcgggcaactgatgggcacc
agtcagggcggcatgtgggtcggcaccttccacgggctggcacaccgcctgctgcgtgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagtgaagaccagtta
cgcttgcttaagcgtctgatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccaaaaagatgaaggcctgcgtccgcatcatattcaa
agctacggtaacccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgtgaccgcgcgggcctggtggacttcgccgagttgctgctgcgcgcccacgaactgtgg
cttaacaagccgcatatcctgcaacactaccgcgaacgttttaccaacatcctggtggac
gaattccaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgatacc
ggcaaagtgatgatcgtcggtgatgacgaccagtcaatctacggctggcgcggggcgcag
gtagagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgcgaacgccctgattgaaaacaac
aacgggcgtttgggtaaaaaattgtggaccgatggcgcggacggtgagccgatttccctc
tattgcgcttttaacgaactcgacgaagcgcgtttcgtcgttaaccgcatcaaaacctgg
caggacaacggcggggcgctcgctgagtgcgccattctctaccgtagcaacgcccagtcg
cgtgtactggaagaagcgttattgcaggccagtatgccgtatcgtatttatggcggtatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcatatctgcgcctgattgccaac
cgtaacgatgatgcagcatttgagcgtgtggtgaatacgccaacgcgtggtattggtgac
cggacgctggacgtagtgcgtcagacatcgcgcgatcgccagttaactctctggcaggcg
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcgg
tttatggaactgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaagggcgaa
aaaggtcagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctacaggcgttcctctcccatgcggcactg
gaagcaggtgaagggcaggcggatacctggcaggatgcggtgcagttgatgacgctacac
tcggcgaaaggtctggagtttccgcaggtgtttattgttggtatggaagagggcatgttc
ccaagccagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgtgcgatgcagaaactgacgctgacctacgcggaaactcgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggcgagctgccggaagagtgt
gtggaagaggtgcgactgcgcgccacggtaagccgcccggtcagccatcagcgcatgggt
acgccgatggtcgagaacgacagtggttacaaactcggccagcgcgtacgccacgccaaa
tttggtgaaggcaccatcgtcaatatggaaggcagcggcgagcatagccgtttgcaggtg
gcattccagggccagggaatcaaatggctggtggcggcttacgcccgactggagacggtg
taa
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