Escherichia sp. E4742: FEM44_15215
Help
Entry
FEM44_15215 CDS
T06276
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
esz
Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esz03016
]
FEM44_15215 (thpR)
Enzymes [BR:
esz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FEM44_15215 (thpR)
Transfer RNA biogenesis [BR:
esz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FEM44_15215 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QCT88436
LinkDB
All DBs
Position
complement(3129866..3130396)
Genome browser
AA seq
176 aa
AA seq
DB search
MSEPQRLFFAIDLPAEIREQIIHWRAAQFPPEAGRPVAAENLHLTLAFLGEVSAEKEKAL
SLLAGRIRQSGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR
PFHPHITLLRDASEAVTIPPPGFNWSYTVTEFTLYASSFARGRTRYTPLKRWTLTQ
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgcaacggctgttctttgccatcgacttacccgcagaaattcgcgaacag
attatccactggcgcgccgcacagtttccgccagaagcggggcgtccggttgccgctgaa
aatttgcatctgacgctggcgtttttaggcgaagtgagcgcagagaaagagaaggcgctt
tctcttttagccgggcgaattcgtcaatcgggcttcactctgacgcttgatgacgccggt
cagtggctgcgttcgcgcgtggtgtggttagggatgcgccagccaccgcgcggcttaatc
cagttagcaaatatgctccgttcgcaggccgctcgcagtggttgttttcaaagcaatcga
ccgtttcatccgcatatcaccttattgcgcgacgccagcgaggcggtgacaatcccgccg
ccaggttttaactggtcatatacggtgacggagtttactctctacgcctcctcgtttgcc
cgtgggcgcacacgctacacgccgctaaaacgctggactctgacgcaataa
DBGET
integrated database retrieval system
