Escherichia sp. E4742: FEM44_16525
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Entry
FEM44_16525 CDS
T06276
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
esz
Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esz03400
]
FEM44_16525 (sbcC)
DNA repair and recombination proteins [BR:
esz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEM44_16525 (sbcC)
Archaeal homologous recombinant proteins
FEM44_16525 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
cobW
nSTAND3
RsgA_GTPase
preATP-grasp_3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCT88668
LinkDB
All DBs
Position
complement(3409252..3412395)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEQHKSTRTELEKLQAQASGVALLAPEQLQSLTDSLQVLTDEEKRLLTAQQ
QEQQSLNWLTRKDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSAALTHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKINALAAITLTLTADEVASAQAQHAE
QRPLRQRLVALHGQIVPQQKRLAQLQVAIQNVTLEQTQRNAALNEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQARLLTLENEVK
KLGEEGAALRGQLDTLTKQLQRDENEAQSLRQDEQALTQQWQAVAASLNITLQPQDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
EEEESWLATRQQEAQNWQQRQNELTALQNRIQQLTPILETLPQSDELPHSEETVALENWR
QVHEQCLALQSQQQTLQQQEVLAVQSLQKIQAQFDTALQDSIFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQALATQTAETLAQHQQHRPGGLDLTVTVEQIQQELAQTHQKLRE
NTTRQGEIRQQLKQDADNRQQQQTLMQQIAQTTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDSTFAVK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgccattaccggcccaaccggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaaccccgcgc
ctctctaacgtttcgcaatcacaaaatgatctcatgacccgcgataccgccgaatgtctg
gcggaagtggaatttgaagtgaaaggtgaagcgtatcgcgcattctggagccagaatcgg
gcgcgtaaccagccggacggtaatttgcaggtgccacgcgtagagctggcgcgctgcgca
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacagcgacgttaacc
gggcttgattacgggcgcttcacccgttcgatgctgctttcacaagggcaatttgctgcc
ttcctgaatgcaaaaccaaaagaacgcgcggaattgctcgaggagttaaccggcaccgaa
atctacgggcaaatctcggcgatggtttttgaacagcataaatcgacccgtactgagctg
gagaaactgcaagcgcaggccagcggcgttgcgttattagcgccagaacagctgcaatcg
cttacagatagtttgcaggtactcactgacgaagagaaacggttactcactgcgcagcag
caagaacaacaatcgctaaactggttaacgcgtaaggacgagttgcagcaggaagccagt
cgccgtcagcaggcactgcaacaggcgttagccgaagaagaaaaagcacaaccgcaactg
gcggccctcagcctggcgcaaccggcaagaaatcttcgtccgcactgggaacgaatagca
gaacacagcgcagcgctaacgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgcgcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagcctgaatgcctggttacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaacccatgcagagcaaaaaattaatgcgcttgcg
gcgatcacgttgacgttaaccgccgatgaagttgctagcgcccaggcgcaacatgctgag
caacgcccactgcgtcaacgcctggttgcgctgcatgggcagattgttccccaacaaaaa
cgtctggcgcagttacaggtcgctatccagaatgtcactctggaacagacgcaacgtaac
gccgcacttaacgaaatgcgccagcgttataaagaaaagacgcagcaacttgccgatgtc
aaaacaatttgcgagcaggaagcgcgcattaaaacgctggaagcccagcgcgcgcagtta
caggcgggtcagccttgtccactttgcggttccaccagccacccggcggttgaggcgtat
caggcgctggaaccgggcgttaatcaggcccggctattaacgctggaaaacgaagtgaaa
aagctcggcgaagaaggcgcggcgctgcgtgggcaactggatacattaacgaagcagctt
cagcgcgatgaaaacgaagcacaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcgcggccagcctcaatatcaccttgcagccacaggacgatattcaaccg
tggctagatgcacaagatgagcacgaacgccagctgcggttactcagccaacgacatgaa
ttacaagggcagattgccgcgcataaccagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcaactcttaacggcattggcaggttacgcactgacattgccacaggaa
gaggaagaagagagctggttggcgacacgtcagcaagaagcgcagaactggcagcaacgc
cagaacgaattaaccgcgctgcaaaaccgtattcagcagctgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcacagcgaagaaacggtggcgctggaaaactggcgg
caagttcacgaacaatgcctcgcgttgcaaagccagcagcaaacgttgcagcaacaggag
gttctggcagtgcaaagtctgcaaaaaattcaggcgcagtttgacaccgcgctacaggac
agcatttttgacgatcagcaggcatttcttgcagcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgtcgtcaggcgcaagcgctggcc
actcagacagctgaaacgctggcacagcatcagcaacaccgacctggcggactggatctc
acggtgacggtggaacagattcagcaagagttagcccaaactcaccaaaagttgcgtgaa
aacaccactcgccagggggaaattcgccagcagctgaagcaggatgcagacaaccgtcag
caacaacaaaccttaatgcagcaaattgcacagacgacgcagcaggttgaggactgggga
tatcttaattcgctgattggctccaaagagggcgataaattccgtaaattcgctcaggga
ctgacgctggataatctggtccatctggctaaccagcaacttacccggctgcacggtcgc
tacctgttacagcgtaaagccagcgaggcgctggaggtcgaggttgttgatacctggcag
gcagatgcggtacgcgacacccgtaccctttccggcggcgaaagtttcctcgtgagcctg
gcactggcgctggcgctttcggatctggtcagccataaaacgcgtattgactcgctgttc
ctcgatgaaggtttcggcacgctggatagcgaaacgctggataccgcccttgacgcactg
gatgccctgaacgccagtggtaaaaccatcggggtgattagccacgttgaagcgatgaaa
gagcgtattccggtgcagatcaaagtgaagaagatcaacggactgggttacagcaaactg
gacagcacgttcgcggtgaaataa
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integrated database retrieval system
