Escherichia sp. E4742: FEM44_16530
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Entry
FEM44_16530 CDS
T06276
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
esz
Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esz03400
]
FEM44_16530 (sbcD)
DNA repair and recombination proteins [BR:
esz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FEM44_16530 (sbcD)
Archaeal homologous recombinant proteins
FEM44_16530 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QCT88669
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All DBs
Position
complement(3412392..3413594)
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AA seq
400 aa
AA seq
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MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYAR
TLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPHRDG
TPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPII
ATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGS
PIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITEQLEQWRDVS
QEPPVWLDIEITTDEYLHDIQRKIQVLTESLPVEVLLVRRSREQRERVLASQQRETLSEL
SVEEVFNRRLALEELDESQQQRLQNLFATTLQTLAGEHEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccttcacacttcagactggcatctcggccagaacttctacagtaaaagccgc
gaagctgagcatcaggcttttcttgactggctgctggagacagcacaaacccatcaggtg
gatgcgattattgttgccggtgatgttttcgataccggttcgccgcccagttacgcccgt
acgttatacaaccgttttgttgtcaatttacagcaaacgggctgtcatctggtggtactg
gcgggaaaccatgattcagtcgccacgctgaatgaatcgcgcgatatcatggcgttcctc
aatactaccgtggtcgccagcgccggacatgcgccgcaaatcttgcctcatcgcgacggg
acgccaggcgcagtgctgtgccccattccttttttacgcccgcgtgacattattaccagc
caggcggggcttaacggtattgaaaaacagcagcatttgctggcagctattactgattat
tatcaacaacactatgccgatgcctgcaagctgcgcggcgatcagcctctgcccatcatc
gccacgggacatttaacgaccgtgggtgccagtaaaagtgacgccgtgcgtgacatttat
attggcacgctggacgcgtttccggcacaaaactttccgccagccgactacatcgcgctc
gggcatattcaccgcgcgcagattattggtggcatggaacatgttcgctattgcggctcc
cccattccactgagttttgatgaatgcggtaagagtaaatatgtccatctggtgacattt
tcaaacggcaaattagagagcgtggaaaacctgaacgtaccggtaacgcaaccgatggca
gtgctgaaaggagatctggcgtcgattaccgaacagctggaacagtggcgcgatgtatca
caagaaccacctgtctggctggatatcgaaatcactactgatgagtatctgcatgatatt
caacgcaagattcaggtattaaccgaatcactgccagtcgaagtattgctggtacgccgg
agtcgtgaacagcgcgagcgtgtgttagccagccaacagcgtgaaaccctcagcgaactc
agcgtcgaagaggtgttcaatcgccgtctggcactagaagaactggatgaatcgcagcag
caacgtctacagaatcttttcgccacgacgttgcagaccctcgccggagaacacgaagca
tga
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