Escherichia sp. E4742: FEM44_17945
Help
Entry
FEM44_17945 CDS
T06276
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
esz
Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esz03400
]
FEM44_17945 (phrB)
Enzymes [BR:
esz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FEM44_17945 (phrB)
DNA repair and recombination proteins [BR:
esz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FEM44_17945 (phrB)
Prokaryotic type
FEM44_17945 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QCT88928
LinkDB
All DBs
Position
3729765..3731183
Genome browser
AA seq
472 aa
AA seq
DB search
MTIHLVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWAAHNMSPRQAELINAQLN
GLRIALAEKGIPLLFHEVDDFAASAEMVKQVCGENRVTHLFYNYQYEVNERARDVEVERA
QRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRLREGVSECVAAPKVRSSGS
IEPAPSITLNYPRQSFDTAHFPVEEKTAIAQLRQFCQNGAGEYEQQRDFPAVEGTSRLSA
SLATGGLSPRQCLHRLLAEQPLALEGGPGSVWLNELIWREFYRHLMTYYPSLCKHRPFIA
WTERVQWQRNPAHFKAWQEGKTGYPIVDAAMRQLNSTGWMHNRLRMITASFLVKDLLIDW
REGEQYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPITQGEKFDREGEFIRQWL
PELRDVPGKAVHEPWKWAQKAGVKLDYPQPIVDHKEARVRTLAAYEAARRGK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccatctggtctggtttcgccaggatttacgtttgcacgataatctcgcgctg
gctgccgcctgtcgcaattcgtctgcacgcgtgctggcgttgtatatcgccacaccacgc
cagtgggcggcgcataacatgtcgccgcgtcaggctgaacttatcaatgctcaactgaat
gggctacgaatagcgctggcggaaaaaggcattcctttgttgtttcatgaagtggatgac
tttgccgccagcgccgaaatggttaaacaggtgtgcggggaaaatcgtgttacccatctg
ttttataactatcagtatgaggtgaatgagcgggcgcgggatgtggaagttgaaagagca
cagcgtaacgtggtgtgtgaaggattcgatgacagcgtgatcctgccgccgggggcggtg
atgactggcaatcatgagatgtacaaagtctttacgccgtttaaaaacgcctggctgaaa
cggctgcgggaaggtgtgtcggagtgcgtcgctgcgccaaaagttcgtagtagcggatcg
atagagcccgcgccatccattacgctgaattatcctcgtcagtctttcgatactgcgcat
ttcccggtggaagaaaaaacggcgattgcgcaattacgccagttttgccagaacggtgcc
ggagaatatgagcaacaacgagattttccggcagtagaaggcaccagtcgtttgtccgcc
agcctggcaacgggtgggttatcgcctcgccagtgtttacatcgcctgttggcggaacag
ccgctggcgctggaaggtggaccgggtagcgtctggcttaatgagctgatctggcgcgag
ttctaccgccatttgatgacgtattatccttcgctgtgtaaacatcgtccgtttattgcc
tggacggagcgtgtgcagtggcagcgcaatcccgcccattttaaagcctggcaagaaggt
aaaacgggatatccgattgtcgatgctgctatgcgtcagcttaacagcactggctggatg
cataaccgtctgcgaatgattacagccagttttctggtgaaagatttgctgatcgactgg
cgcgaaggcgagcagtatttcatgtcacaactgattgatggtgatttggcagcgaataac
ggcggctggcagtgggccgcttctaccggaaccgatgctgccccttattttcgtattttc
aacccgataactcagggcgagaaatttgaccgcgaaggcgagtttatccgccagtggcta
ccggagttgcgcgatgtgccagggaaagcggtgcatgagccgtggaagtgggcgcagaaa
gcgggcgtgaagctggattatccgcaaccgattgtcgatcataaagaagcgagagtacga
acgttggcagcgtatgaggcggcgaggagggggaaataa
DBGET
integrated database retrieval system
