Escherichia sp. E4742: FEM44_19100
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Entry
FEM44_19100 CDS
T06276
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
esz
Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
esz03009
]
FEM44_19100
Ribosome biogenesis [BR:
esz03009
]
Prokaryotic type
ribosomal protein modification factors
FEM44_19100
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QCT89137
LinkDB
All DBs
Position
complement(3982340..3984100)
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPDG
LLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAE
GFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWSFSGTTEEEFATLM
AIFKKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNGMGSHLRETILSLPGS
EWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGPDNGWYTLRIGELKAMLALAGGDLEQ
ALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAA
SAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatccccggcaaagatgccgcactggaagattccatcgctcgcttc
cagcaaaaactctccgacctcggttttcagattgaagaggcctcctggctgaatcccgtg
cctaacgtctggtctgtacatattcgtgacaaagagtgcgcactgtgttttaccaacggt
aaaggcgcaaccaaaaaagcggcgctggcatctgccctcggtgaatatttcgagcgtctc
tcaaccaactacttttttgcagacttctggctgggcgaaaccatcgccaacggtccgttc
gtgcattatcccaacgaaaaatggttcccgctgaccgaaaatgacgatgtgccagatggg
ctgctcgatgaccgtctgcgcgcattttacgatccggaaaatgaactgaccggtagcatg
ctgattgacctgcaatccggtaacgaagatcgtggtatttgcggcctgccgtttacgcgt
cagtccgacaatcagaccgtttatattccgatgaatatcattggtaacctgtatgtctcc
aacggtatgtccgcaggtaatacccgcaacgaagcacgcgttcagggattgtctgaagtt
ttcgaacgctacgtgaaaaaccgcattattgctgaaagcatcagcctgccagagatcccg
gcagacgtgctggcgcgttacccagcggtggttgaagccatcgaaacactggaagcagaa
ggtttcccaatctttgcttatgatggttcgcttggcggtcaatatccggtgatctgcgtg
gtactgttcaatccagctaacggcacctgtttcgcctctttcggcgcgcatcctgatttt
ggcgttgcactagaacgtaccgtaaccgaactgcttcaggggcgtggtcttaaggacctg
gatgtatttactccgccaaccttcgatgatgaagaagtcgctgaacatactaacctcgaa
acgcactttatcgactccagcggtttgatctcttgggacctgttcaagcaggatgccgat
tatccgtttgtggactggagcttctccggcaccactgaagaagagttcgccacgctgatg
gctatcttcaaaaaggaagataaagaagtttatattgccgattacgagcatctgggtgtc
tacgcttgccgaattatcgtgcctggcatgtccgatatttatccggctgaagatttatgg
ctggcaaataacggtatgggcagccatttacgggaaacaatcctgtcactgcccggtagc
gagtgggaaaaggaagattacctgaacctcatcgagcaactggatgaagaaggttttgat
gactttacccgcgtgcgtgagctgctgggtctggcgaccggaccggataacggctggtac
actctgcgtatcggtgaattaaaagccatgctggcgctggctggtggcgatctggaacag
gctctggtctggaccgaatggacgatggaatttaactcatcagtatttagtccggaacgc
gccaactattatcgttgcctgcaaacgttgttattactggcgcaggaagaagatcgccag
ccactgcaatatctgaatgcgtttgttcgcatgtacggcgcagatgccgtagaagccgcc
agtgcggcaatgagcggcgaagcggcattttatggcctacaaccagtagatagcgatctt
cacgcgtttgctgcgcatcagtcgttgttgaaggcctacgaaaagctgcagcgcgccaaa
gcagcattctgggcaaaataa
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