Escherichia sp. E4742: FEM44_19200
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Entry
FEM44_19200 CDS
T06276
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
esz
Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esz01002
]
FEM44_19200 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
esz01011
]
FEM44_19200 (ldtD)
Peptidases and inhibitors [BR:
esz01002
]
Cysteine peptidases
Family C82
FEM44_19200 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
esz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FEM44_19200 (ldtD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QCT89157
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Position
4008511..4010358
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AA seq
615 aa
AA seq
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MLLNMMCGRRLSAISLCLAVTFAPLFSVQADEPEVIPGDSPVAVSEQGDVLPQAQATAIM
AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFVANIPVKGTRWLYSSKP
YALSTPPLSVINHWQVALDNGQLTTFVSGLAPQHPQYSAMHESLLTLLSDSKPWPQLTGK
ATLRPGQWSNDVPALREILQRTGMLEGGPKIALPGDETSTGAVVSPSAAAIETVETKPMD
KQTTARSKPAPAVRAAYDNELVEAVKRFQTWQGLGADGSIGPATRDWLNVTPAQRAGVLA
LNIQRLRLLPSELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV
VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSKDALDPWQIDWSTITASNLP
FRFQQAPGPRNSLGRYKFNMPSSDAIYLHDTPNHNLFKRETRALSSGCVRVNKASDLANM
LLQDAGWNDKRISDALKRGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA
RSSSQIVSKAEQLIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaacatgatgtgtggtcgtcggctttcggcaatcagtttgtgcctggccgta
acattcgctccactgttcagtgtgcaggctgatgagcctgaggttatccctggtgacagc
ccggtggctgtaagtgaacagggagatgtactgccgcaggcgcaagccacggcaataatg
gcggggatccaaccgctacctgaaggtgcggcagaaaaggcccgcacgcaaattgaatca
caattacctgcaggttataagccggtttatcttaaccagcttcaactcttgtatgcagca
cgcgatatgcagccgatgtgggaaaatcgtgatgcagttaaagctttccagcagcagttg
gcggaagtggcgattgccggttttcaaccgcagtttaacaaatgggtggagttactgact
gaccctggcgttaacggtatggcgcgcgatgtggtgctatcggatgcaatgatggggtat
ctccatttcgtcgcaaacattccggtcaaaggtacccgctggctgtacagtagtaaacct
tatgcgctctcaacaccgccgctctcggtcattaaccattggcaggtggcgctggataac
ggtcaattgaccacgtttgtctcagggttggcaccacagcatccgcaatattcagcaatg
catgaatctttgctgaccttattgagtgattccaaaccgtggccgcaactgaccggtaaa
gcaacgctacgccctggtcaatggagtaacgacgtcccggcgctgcgcgagattttgcag
cgtacaggtatgctcgaaggtgggccgaaaatagcactgccgggtgatgaaacatcgaca
ggcgcggtagttagtccgtctgccgctgcaatcgaaacagtcgaaactaagccgatggat
aagcaaactacagctcgcagtaaacctgcgccagccgtccgagctgcctatgataatgag
ctggtggaagctgtgaaacgttttcagacatggcaaggcttaggggcagatggctccatt
ggcccggcaacgcgagactggttaaacgtcacgcctgcacagcgagcgggcgtgctggcg
ctcaatatccagcgattgcgtttgctgccatccgagctttctactggcatcatggttaac
attccggcctattcgctggtctattatcagaacggtaatcaagtgctggattcacgggtc
attgtcggtcgtcccgatcgcaaaacgccgatgatgagcagtgccttaaacaatgtggtg
gtaaacccgccgtggaacgtaccaccgacgctggcacgcaaagatattctgccaaaggtg
cgtaacgatcctggttatcttgaaagccatggctatacggttatgcgcggctggaacagc
aaagatgcgcttgacccgtggcagattgactggtcgacgatcacagcatcgaatttgccg
ttccgcttccagcaagctcctggcccgcgaaattcgctaggacggtataaatttaatatg
ccgagttcagacgctatctatttgcatgacacgccgaatcacaatcttttcaaacgtgaa
acgcgcgcgttgagttctggctgtgtgcgggtgaataaggcgtcggatctggcaaatatg
ctgctgcaggatgctggctggaatgacaagcgtatctccgatgctctgaagcggggtgat
acccgttacgttaatattcgtcaatcgataccggttaatctttactatctgaccgccttt
gttggtgcagatggtcgtacccaatatcgtacagatatttacaattatgatctgcctgca
cgatccagctcgcaaattgtctcaaaagcggaacaattaatcagataa
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