KEGG   Escherichia sp. E4742: FEM44_19385
Entry
FEM44_19385       CDS       T06276                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
esz  Escherichia sp. E4742
Brite
KEGG Orthology (KO) [BR:esz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:esz03400]
    FEM44_19385 (helD)
Enzymes [BR:esz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FEM44_19385 (helD)
DNA repair and recombination proteins [BR:esz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FEM44_19385 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 DEAD
Other DBs
NCBI-ProteinID: QCT90375
LinkDB
Position
4052138..4054192
AA seq 684 aa
MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLLAIHCKRGLVWGELEFV
LPDEKVVRLHGTEWAETQRFHHHLDAHWRRWSEEMSEIAAGVLQQQLDLIAARTGENKWL
TREQTTGVQQQIHQALSALPLPVNRLEEFDNCREPWRKCQAWLKDIEGSRLQHNQAYTET
MLNEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEAS
PEQILLLAFGRKAAEEMDERIRERLHTEEITARTFHSLALHIIQQGSKKVPTVSNLENDT
AARHELFIAEWRKQCSEKKAQAKGWRQWLMEELQWSVPEGNFWDDEKLQRRLASRLDRWV
SLMRMHGGAQAEMIASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIA
ILEKGRFISPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQM
SLTTAFHENFGEGDRCNLDTTYRFNSRIGEVANRFIQQNPNQLKKPLNSLTNGDKKAVTL
LDESQLDALLDKLSGYVKPEERILVLARYHHLKPVTLDKATTRWPKLQIDFMTIHASKGQ
QADYVIIVGLQEGGDGFPAVARESIMEEALLPPVEEYPDAEERRLMYVALTRARHRVWVL
FSKENPSPFVDDLKKLDVPVARKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactgaaagcgacaactcttggcaaacgtctggcacagcacccttacgatcgggcg
gtgatcctcaatgccgggataaaagtttccggcgatcgccacgaataccttattcctttc
aatcaattactggctattcactgcaaacgtggtttggtatggggtgagctggaatttgta
ttgcctgatgaaaaagtcgtgcgtctgcatggcactgaatgggcagagacgcagcgtttt
caccatcatcttgatgctcactggcggcgctggagcgaggaaatgagcgaaattgccgct
ggcgtattgcagcaacaactggatcttattgctgcccgcactggagaaaataaatggctg
acgcgggagcaaaccactggagtacagcaacaaattcatcaggctttgtctgcgttgcca
ttaccggttaatcgcctggaggaatttgataactgtcgtgagccgtggcgcaaatgtcag
gcctggctgaaagatattgaaggcagtcggttgcagcataatcaggcgtataccgaaaca
atgcttaacgaatatgcggattttttccgtcaggttgagtcttcaccgcttaatccggcg
caggcccgggcggtggttaatggtgagcattccctgttagtgctggctggcgcaggaagc
ggaaaaacgtctgtactggtggcgcgcgctggctggttattggcgcgtggtgaagcatca
cccgagcaaattttattgctggcgtttggtcgaaaagcggcggaagagatggacgagcgg
atccgcgaacggctgcataccgaagagattaccgcgcgcacgtttcattctctggccctg
catattattcagcaaggcagcaaaaaagtaccgacagtcagtaacctggaaaatgacacc
gcagcccgccatgaactctttattgctgagtggcgcaagcagtgtagtgaaaagaaagca
caggcgaagggctggcgacaatggttgatggaagaactgcagtggtcagtgccagaaggc
aacttctgggatgatgaaaaattgcagcgtcgtctcgcatctcgcctcgatcgctgggtc
agtctgatgcggatgcacggcggcgcgcaggctgaaatgattgccagtgcgccagaagag
attcgggatctgttcagtaaacgaatcaaattgatggcaccgttgctgaaagcctggaaa
ggtgcgctgaaagcggaaaacgccgtcgatttttcaggtctgattcatcaggcgattgct
atccttgagaaagggcggtttatcagcccgtggaaacatattctggttgatgaattccag
gatatctccccacagcgagcggccttgctggcagcattgcgtaaacaaaatagtcagaca
acgttgtttgccgttggcgatgactggcaggctatttaccgcttcagcggtgcgcaaatg
tcgctcaccacggccttccatgaaaacttcggtgaaggcgatcgctgtaatttagacacg
acttaccgttttaatagccgtatcggagaggtggcaaaccgttttattcagcagaaccct
aatcagttgaaaaaaccgctgaatagcttaacgaatggtgacaaaaaagccgtcaccttg
ttggatgagagtcagcttgacgctttactggacaagctatctggttatgtcaaacccgaa
gagcgcattctggttctggctcgttaccaccatctgaagcccgttactctggataaagcc
acgacgcgttggccgaagctgcaaatcgactttatgaccattcatgccagcaaagggcaa
caggccgactacgtcatcatcgttggtttgcaggaggggggtgatggcttcccggctgtg
gcgcgtgagtccattatggaagaggcgctactgccgcctgtagaggaatatccggacgcc
gaagaacggcgattgatgtacgttgcgctcactcgcgcacggcatcgggtttgggtactg
ttcagcaaagagaatccttctccctttgtagacgacctgaaaaaactggatgtaccggta
gcaaggaaaccgtaa

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