Escherichia sp. E4742: FEM44_22680
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Entry
FEM44_22680 CDS
T06276
Symbol
lsrD
Name
(GenBank) autoinducer 2 ABC transporter permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
esz
Escherichia sp. E4742
Pathway
esz02010
ABC transporters
esz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
esz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FEM44_22680 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FEM44_22680 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esz02000
]
FEM44_22680 (lsrD)
Transporters [BR:
esz02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
FEM44_22680 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
QCT89780
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Position
4666371..4667363
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AA seq
330 aa
AA seq
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MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGG
IDISFGSTIGLCAIALGVLFQSGVPMPLAILLTFLLGALCGVINAGLIIYTKVNPLVITL
GTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLW
LHKTNAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDL
GASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGAL
LIVVVVGRSVSLHRQQIKEWLARRANNPLP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcgctacggttgggaactggcccttgccgcactgctggttattgagattgtc
gcatttggtgcaattaacccgcggatgttagatctcaatatgctgctgttcagcaccagt
gactttatctgcattggcattgtcgccctaccgctgacgatggtgattgtcagtggcggg
atcgatatttcgtttggttcgaccatcggcttgtgcgccattgcattaggcgtactgttt
caaagtggtgtgccgatgccgctggcgattcttctgacctttctgctcggcgcattgtgt
ggagtgattaacgccggattaattatctataccaaagttaacccgctggtgattacgctt
ggcacgctgtatctgtttgccggaagtgctctgctgctttccgggatggccggagcgacg
gggtacgaaggtattggcggattcccgatggcgtttacagatttcgctaacctggatgtg
cttggactccccgttccgctgattatcttcctgatatgtctcctcgttttctggctctgg
ctgcataaaactaatgccggacgtaacgtgtttttaattggacaaagcccgcgcgtggcg
ctttatagcgcgattccagttaaccgcaccttatgtgcgctctatgccatgacggggctg
gcgtctgctgtcgccgcggtgctgctggtatcgtattttggttcagcacgttccgatctc
ggtgcgtcgtttctgatgcccgccatcaccgcagtggtgctcggcggtgccaatatttat
ggcggttctggttccattatcggcactgccattgcggttttattagtgggatatttgcaa
caaggtttgcaaatggcaggagtgccaaatcaggtgtccagcgccctttccggtgcgctg
cttatcgtcgttgtcgttggtcgttccgttagcctgcatcgccagcaaattaaagagtgg
ctggcgcgtcgggccaataacccattgccataa
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