Erwinia tasmaniensis: ETA_08630
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Entry
ETA_08630 CDS
T00711
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
eta
Erwinia tasmaniensis
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eta03019
]
ETA_08630 (hrpB)
Enzymes [BR:
eta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ETA_08630 (hrpB)
Messenger RNA biogenesis [BR:
eta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ETA_08630 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
AAA_22
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CAO95909
UniProt:
B2VCM9
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All DBs
Position
962383..964842
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AA seq
819 aa
AA seq
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MLLWSQNVSSLPVSAVLPELLTALQSSPQILLAAPTGAGKSTWLPLQILQLAGLTGRILL
LEPRRLAARNVAQRLAEQLGEEPGATVGYRMRGESRSGANTRLEVVTEGILTRMLQQDPM
LEGVSLVILDEFHERSLQGDLALSLLLDVQTALRDDLRVLIMSATLDNARLSAWLPDAPL
IASDGRSWPVERRYQSLNSSLRFEEAVARQTSQLLREEPGSLLLFLPGVAEIQRVQTQLA
GLIASDVDLCPLYGALSLAEQRRAILPSPVGRRKVVLATNIAETSLTIEGIRLVVDSTLE
RGALFDVRSGLTRLQTQRISQASMTQRAGRAGRLEPGICLHLLAQEQAERAAAQGEPEIL
NSDLSALWLDLLQWGCRDVSQLNWLDAPPPAAIAAAQRLLLQLGATDGEGRLTGSGRKMA
ALGSEPRYAALLIAAGENADAVATAAQLVAMLEEPMRGSVDLRDGFQRRLPQWQRRARQL
QQRLKISGGTTDEGRLAELLAAAFPDRIARRRGAEGRYQLANGSGAALDREDGLTRHEWL
IAPALLQGNAQPDARILQALPLDIDLLIRQCPALVQQQTEVEWDEEKGTLRAWRREQIGQ
LVLRSQPLAKPDEDELHAAMLRWIRQKGLSVLNWTPQAEQLRLRLLCAAQWLPEGDWPAA
DERALLASLEQWLLPTMGGVRDAKGLRQLDMANALLQFLTWTQRQQLDSALPTHYTVPTG
SRLPIRYYQDKPPALAVRLQEMYGEAQNPCIAQGRVALVLELLSPAQRPLQITRDLAGFW
AGAWREVQKEMKGRYPKHLWPDDPANALPTRRVKKFSTP
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgttgttatggagtcaaaacgtgagctcattaccggtcagcgccgtattacccgagctg
ttaaccgcgctgcaatcttcaccccaaattctgctggccgccccgaccggggcgggtaaa
tcgacctggctgccattacagatcctgcaactggccgggcttaccgggcgtattctgctg
ctggaaccgcgccggctggcagcgcgcaatgttgcccagcggctggcggaacagctgggc
gaagaaccgggggcgaccgttggctaccgcatgcgcggcgaaagccgtagcggagccaac
acccggctggaggtggtgacggaagggatactgacgcgcatgctgcaacaggacccgatg
ctggaaggggtgtcactggttatcctcgacgagttccacgagcgcagcctgcagggcgat
ctggccctgagcctgctgctcgacgtgcagaccgcgctgcgtgacgatctgcgcgtgctg
attatgtcggccacgctggacaatgcacgcttaagcgcatggctgccggatgccccgctg
atcgcctcggacggacgcagctggccggtggagcggcgctatcagtcgttaaatagcagc
ctgaggtttgaggaggcggttgcccgtcagaccagccagctgctgcgcgaagagccggga
tcgctgctgctgtttctgcccggcgtggcggaaattcagcgcgtgcagacccagctggct
gggcttatcgccagcgatgtcgatctctgcccgctgtacggcgcgctctcgctggccgag
cagcggcgggcgatcctaccttccccggtggggcggcgtaaagtggtgctggcgaccaac
atcgctgaaaccagcctgaccattgagggtattcgcctggtggtggacagcacgctggag
cgcggcgcgctgtttgacgtgcgcagcggactcacccgcctgcaaacccagcgcatcagc
caggcctcaatgacccagcgcgccgggcgcgccgggcgactggagccgggtatttgcctg
catctgctggcacaggaacaggcggagcgcgcggcggcgcagggtgaacctgaaatcctg
aacagcgacctctccgccctgtggctggatctgttgcagtggggctgccgcgacgtcagt
cagctcaactggctggatgcaccgccgcccgccgctattgccgccgcccaacggctgctg
ttgcagctgggggcaaccgacggtgaaggcaggctcaccggcagcgggcgcaaaatggcg
gcgctcggcagcgaaccgcgctatgcggccctgctgattgccgccggagagaatgcggat
gcggtcgccacggcggcccagctggtggcaatgctggaggagccgatgcggggatcggtc
gatctgcgtgacggtttccagcgccgattgccgcagtggcagcggcgcgcgcgccagctc
cagcagcgcctgaagatcagcggcggcacaacggatgagggaaggctggccgagctgttg
gccgctgcctttcctgaccgcatcgcccggcggcgcggggcagagggtcgctaccagttg
gctaacggcagcggtgctgcgctcgatcgcgaagatggcctgacacgccatgaatggctg
attgcccccgccctgttacagggtaatgcccagccggatgcgcgcattctgcaagcgctg
ccgctggatattgacctgctgatccgtcagtgccctgcgctggtacagcagcagactgag
gtggagtgggacgaggaaaaaggcacgctgcgcgcctggcggcgtgagcagattggtcag
ctggtactgaggtcgcagccgctggcaaaacctgacgaagacgaactgcacgcggcgatg
ctgcgctggatcaggcagaagggattatcggtgctcaactggacgccgcaggcggaacag
ctgcggctgcgattgctgtgcgccgcgcagtggctgccggaaggcgactggccggctgcc
gacgagcgcgcgctgctggcttcgctggaacagtggctgctgccgacaatggggggcgtg
cgtgatgcaaaagggctgcgccagctggatatggccaacgcattattacaatttctcaca
tggacccagcgtcagcagctggatagtgcgctgccaactcattacactgtgccgaccgga
agccggctgccgatccgctattatcaggataagcctccggcgctggcggtgcgcctgcag
gagatgtacggcgaggcgcaaaacccctgcattgcacaggggcgcgtcgcgctggtgctg
gagctgttatctccggcgcagcggccgctgcaaatcacccgcgatctggccggattctgg
gccggtgcctggcgtgaagtacagaaagagatgaaagggcgctatcctaaacatctgtgg
cctgatgatccggccaatgccttaccgacacggcgggtgaaaaagttttccacgccgtaa
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