Erwinia tasmaniensis: ETA_16280
Help
Entry
ETA_16280 CDS
T00711
Symbol
rnb
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
eta
Erwinia tasmaniensis
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eta03016
]
ETA_16280 (rnb)
Enzymes [BR:
eta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ETA_16280 (rnb)
Transfer RNA biogenesis [BR:
eta03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ETA_16280 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
CAO96674
UniProt:
B2VKS8
LinkDB
All DBs
Position
complement(1842001..1843944)
Genome browser
AA seq
647 aa
AA seq
DB search
MFQDNPLLAQLKEKLHSQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPFMKKVMHGDRV
SAVIQSDKDREVADPETLIEPFLTRFVGRVQKKDDRLSIIPDHPLLKDAIQCRPERSVKH
DFQAGDWAVAEMRRHPLKGDRTFYAELTEFITTAEDHLAPWWVTLSRHNLEREAPDVTTP
QSMLDEQLEREDLTSLPFVTIDSASTEDMDDALYVEDAGNGALKLIVAIADPTAYVPVGS
KLDAVAAERAFTNYLPGFNIPMLPRQLSDDICSLRPHERRPVLACRITLAADGTPADDVQ
FFAAWIESHAKLAYNDVSDWLETGGSSAWQPENEAIANQIRLLNRLCLARSEWRQAHALV
FKDRPDFRFLLGEKGEVLDIIAEHRRIANRIVEESMILANICAATVLRDRLGFGIYNVHL
GFDEANAEQAAAVLANHGVTADPLAIATLEGFRNLRRELDALPTQFLDSRIRRFQSFAEV
STTPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGEQSARPADELSLKMAERRRQ
NRMAERDVGDWLYSRFLQKAAGSEQRFSAEVIDVSRGGMRVRLQENGAVAFIPAPFIHAV
RDEMVCSNENGSVQIKGEVAYRVTDLIEVTIAEVRMETRSIVARPVA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagctcaaagagaagctccactcccagacgccg
cgcgttgagggtgtggtaaaaggtactgaaaaaggtttcggcttcttagaagtcgatgcg
cagaaaagttactttattcccccaccgttcatgaaaaaagtcatgcacggtgaccgtgtg
agtgcggttattcaaagcgataaggatcgcgaagttgccgatccggaaacgctgattgaa
ccgttcctgacgcgctttgtcggccgcgtgcagaagaaagacgatcgcctgtcgattatt
cccgaccatcccctgttgaaagatgccattcagtgccgccccgagcgcagcgtgaagcat
gacttccaggctggcgattgggcagtggctgaaatgcgccgccatccgctgaaaggcgat
cgcaccttttatgccgagctgaccgaatttattactacggcagaagaccaccttgcgccg
tggtgggtgacgttgtcacgccataatctggagcgtgaagcgccggatgtcaccacgcca
caatcaatgctggatgaacagctggaacgtgaagacctcacttctctgccgtttgtcacc
atcgacagtgccagcactgaagatatggacgatgcgctgtatgtggaagacgcgggtaac
ggtgcgctgaaactgatcgtcgctatcgccgatcctaccgcctacgtgccggtgggcagc
aagctggatgccgtggccgctgaacgcgccttcactaactacctgccgggcttcaatatc
ccgatgctgccccgccagctgtcggatgatatttgctctctgcgcccacatgagcgccgt
ccggtactggcctgccgcatcaccctcgccgcagacggtacgcccgctgacgacgtgcag
ttcttcgccgcgtggatcgaatcgcacgcgaagctggcctataacgacgtctccgactgg
ctggaaaccggtggttccagcgcatggcagccggagaatgaggccattgccaaccagatc
cgcctgctgaatcgcctctgtctggcgcgcagcgagtggcgtcaggcgcatgccttggtg
ttcaaagatcgccctgacttccgcttcctgctgggtgagaaaggcgaagtgctggatatt
attgccgaacatcgccgcattgctaaccgcattgttgaagaatcgatgatcctcgccaac
atttgcgctgccaccgtgctgcgcgacaggctgggcttcggcatctataacgttcacctc
ggcttcgacgaagccaacgccgagcaggccgcggcagtactggccaatcacggcgttacc
gccgatccgctggcgattgccacgctggagggtttccgcaatctgcgtcgcgaactcgat
gccctgccaacacagttcctcgacagccgtatccgccgcttccagtcatttgcggaagtc
agcaccacgccaggcccgcactttggtctcggcctggaggcatatgcgacctggacgtcg
ccaatccgtaagtatggcgacatggttaaccaccgcctgctgaaagcgattatcaaaggc
gaacagagtgcacgccctgccgatgaactgtcgctgaagatggctgaacgccgtcgtcag
aaccgtatggcggagcgcgatgttggcgactggctgtattcacgtttcctgcagaaagcg
gccggcagcgagcagcgtttcagtgctgaagtgattgacgtttctcgtggcggcatgcgt
gtccgcctccaggaaaacggcgccgtggcttttattcccgccccgttcattcatgcggtg
cgtgatgaaatggtgtgcagtaatgaaaacggcagcgtacaaattaagggtgaagtggcg
tatcgcgtaaccgatctgattgaggtaaccattgctgaagtgcgcatggaaacccgcagt
atcgtggcgcggcccgtagcctga
DBGET
integrated database retrieval system
