Erwinia tasmaniensis: ETA_21460
Help
Entry
ETA_21460 CDS
T00711
Symbol
ycaO
Name
(GenBank) Conserved hypothetical protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
eta
Erwinia tasmaniensis
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eta03009
]
ETA_21460 (ycaO)
Ribosome biogenesis [BR:
eta03009
]
Prokaryotic type
ribosomal protein modification factors
ETA_21460 (ycaO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
CAO97192
UniProt:
B2VC81
LinkDB
All DBs
Position
2418437..2420194
Genome browser
AA seq
585 aa
AA seq
DB search
MTQTYIPGKDAALEVSIARFQQKLQDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGQQIANGDFVHYPDEKWFPLPDDDRLPDG
ILDSRLRQFYDPENEVSASDLVDLQSGNAARGICALPFTRQSDRQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERHIKNRIIAESISLPTIPQEVINRYPGVVEAIATLEAE
GFPIFSYDASLGGKYPVICVVLFNPENGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKDDADYAFADWSFKGSTEEEFATLM
AIFKSEDQEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAYLRDTLLSLPES
RWEQADYLSLLEQLDEDGHDDFTRVRELLGLATGKDNGWYTLRIGELKSMLALAGGDLQQ
ALIWTEWTMEFNQSIFSAERANYYRCLQTLLLLSQEEERDPQQYYGAFVRMYGQSAVDAA
SAAISGEAPFYGLQNVDSDLKAFPAHQSLLAAYEKLQVAKRRHWK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacttatatcccaggcaaagacgccgcgctggaagtttccatcgcacgcttt
cagcaaaaattgcaggatctcggcttcaacattgaagaagcatcgtggctgaacccggtt
ccacacgtctggtcagtccatattcgcgatcgagactgcccgctatgtttcactaacgga
aagggtgccagcaaaaaggcggcactggcctctgcgctgggtgaatattttgaacgtctg
tccaccaactatttctttgcagatttttggctaggccagcagatcgccaacggcgatttc
gtccattatcctgacgagaagtggttcccattgccggatgatgatcggttgcccgatggc
attctcgattcgcgtttgcgtcagttctatgatccggaaaatgaagttagcgccagcgat
ctggtcgatctgcaatcgggtaatgctgcacgcggcatctgtgcgctgccctttacccgc
cagtcggatcggcaaaccgtctatattccgatgaatattatcggcaatctgtatgtgtca
aatggtatgtcggcgggaaataccgccaacgaagcgcgtgtacagggcctttcagaggtg
tttgaacgccatattaagaaccgtattatcgccgaatccatcagcctgccaaccattcca
caagaagtcattaaccgctatcccggcgtagtggaagcaattgccacgcttgaagcagaa
ggtttccctatcttctcttatgatgcttcactaggcggtaagtatccggtgatctgcgta
gtgttgttcaaccctgaaaacggtacctgttttgcctcgttcggggcgcatcctgacttt
ggcgtggccctggaacgtaccgtcaccgaactgttacaagggcgcggcctgaaagatctg
gacgtctttactccgccaaccttcgatgacgaggaagtggccgagcatgccaacctggag
acgcatttcatcgactcaagcgggctgatttcctgggatatgtttaaggacgatgccgat
tacgcctttgcggactggagctttaaaggttcgactgaagaagaatttgccacgctgatg
gcgatctttaagtcggaagatcaggaagtttatatcgcggattatgagcatctcgatgtt
tacgcttgccgtatcatcgttccgggcatgtcagatatctacccggcagaagatctgctg
ctggccaataacagtatgggcgcttacctgcgtgacacccttcttagcctgccggaaagc
cgctgggaacaggcagactatctgtcgctgctagaacagctggatgaagatggccacgac
gacttcacgcgtgtgcgcgaactgcttggcctggcaaccggtaaagataacggttggtat
acgctgcgtattggagagctcaagtccatgctcgccctggcgggcggagatctgcaacag
gcgctaatttggaccgaatggactatggagttcaaccagtcaattttcagtgcagaacga
gcaaactactaccgctgtctgcagacactactgctgctaagccaggaagaagaacgcgac
ccgcagcagtactatggtgccttcgtacgtatgtatggtcagagcgcggtagatgcggca
tcggccgctatttcgggtgaagcaccgttctatggtttacagaacgtagacagcgatctg
aaagcattcccggcgcatcagtctctgctggctgcctatgaaaaactgcaggtcgctaag
cgccgtcactggaaataa
DBGET
integrated database retrieval system
