Erwinia tasmaniensis: ETA_22900
Help
Entry
ETA_22900 CDS
T00711
Symbol
alkA
Name
(GenBank) Putative DNA-3-methyladenine glycosidase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
eta
Erwinia tasmaniensis
Pathway
eta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETA_22900 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eta03000
]
ETA_22900 (alkA)
03400 DNA repair and recombination proteins [BR:
eta03400
]
ETA_22900 (alkA)
Enzymes [BR:
eta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ETA_22900 (alkA)
Transcription factors [BR:
eta03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ETA_22900 (alkA)
DNA repair and recombination proteins [BR:
eta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ETA_22900 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAO97336
UniProt:
B2VBT5
LinkDB
All DBs
Position
2588245..2589696
Genome browser
AA seq
483 aa
AA seq
DB search
MIDPVSAYRALTSRDARFDGVFYVGVTSTSIYCRPVCPVKAPRAENCLFFATAEAAEKAS
FRPCLRCRPELAPGNAPVDSGQRIAERLVQRIDEGLAEQAESLDDIAAEFHLSLRQLRRI
VKRELGVSPQELRQTRRLLLAKQLLTETQLPVTHIAYASGFASLRRFNAVFSGHYRMSPS
SLRKTSAGQDGVLNSTDTSRLLLSYRPPYDWQAMLNFLRQRALSGVEYVDENSYARTVRL
GAHAGWIRVTQIEMKNVLRVEFTHSLTPVLSLLLRRLRNLFDLNARPDLIAQQLGQDPLL
CSSLAAHPGLRVPGAFDGFEMAVRAILGQQITVKAAATLAGRFAKTFGDEIATPFDRLSH
LSPTAESVAQCTVDRVSGLGIISSRSRCVLALAERCALRAPDLDAVSQPERSIEQLLKIP
GIGDWTAQYIAMRALRWPDAFPAGDLVVRNNLGRISAKLARARSVAWSPWRSYAVMHIWL
ATN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcccgtttccgcttatcgcgcgctcacttcgcgtgatgcacgtttcgatggt
gtattttacgttggcgtgacctctacctctatatattgtcgtccggtttgccctgtaaaa
gcgcctcgcgcggaaaactgcctgtttttcgccacggcagaagctgcagaaaaggcctct
tttcgcccctgcctacgctgtcgcccggagttagcacccggcaatgctccggtggatagc
ggccagcgcatcgccgagcggctggtacaacgcattgatgaagggctggccgaacaggct
gaaagtctggatgatatcgctgcagaatttcatcttagcctccgtcagctgcgacgcatc
gttaagagggagctgggtgtatcaccgcaagagctgcgccagacacggcggttgctgctg
gcaaaacagttactcactgaaacccagctgccggtgacccatattgcctatgccagtgga
tttgccagcctgcgccgttttaacgccgtgttcagcggtcattaccgcatgtccccctca
tctttgcgtaaaacgagcgccgggcaggatggcgtgctgaatagcaccgacacatcaaga
ttgttattgagctaccgtccgccctatgactggcaggcgatgctgaactttctgcgacag
cgcgcgctgtccggcgttgaatatgttgatgagaacagctatgcccgcaccgtgcgtctg
ggggctcacgccggatggatccgggtcactcaaatagagatgaaaaatgtactgcgggta
gagtttacccactcactgacgccggtattgtcacttctgctacgcagattgcgcaatctg
tttgacctcaacgctcgcccggacctgattgcacagcagctcggccaggatcctctatta
tgctcttctctggctgcgcatcccggacttcgcgtacccggcgctttcgacggttttgag
atggcggtaagagcgatcctcggccagcaaattaccgtaaaggccgccgccacgctcgca
ggccgttttgcgaagacttttggtgatgagatcgctacgcctttcgatcgtctatcacac
ctttcaccaacggcggaaagcgttgcacaatgcacagtcgatcgggttagcggcctgggg
attatcagctcacgcagccgctgcgtccttgctctggcagagcgctgcgcgctgagagcg
ccagaccttgatgcggtcagccagccggagagaagtattgagcagctgctaaaaatcccg
gggatcggtgactggacggcgcagtacattgccatgcgtgcgctacgctggccggatgcc
ttcccggcaggggatctggtggtgcgtaataatctgggcaggataagtgcaaagctggcc
cgggcacgatctgttgcatggagtccatggcgcagctacgcggtaatgcacatctggctg
gcaacaaattag
DBGET
integrated database retrieval system
