Erwinia tasmaniensis: ETA_27450
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Entry
ETA_27450 CDS
T00711
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eta
Erwinia tasmaniensis
Pathway
eta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ETA_27450 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eta03400
]
ETA_27450 (recD)
Enzymes [BR:
eta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ETA_27450 (recD)
DNA repair and recombination proteins [BR:
eta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETA_27450 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_11
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
UvrD_C
AAA_16
T2SSE
AAA_28
MoCF_biosynth
FtsK_SpoIIIE
PhoH
TrwB_AAD_bind
Phageshock_PspD
DEAD
MukB
SRP54
DUF87
NTPase_1
CbiA
Motif
Other DBs
NCBI-ProteinID:
CAO97791
UniProt:
B2VFV9
LinkDB
All DBs
Position
complement(3053556..3055406)
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AA seq
616 aa
AA seq
DB search
MTLAEALQLAQHQRLLRPLDVQFARMVATEGQPALMLAAALVSRDAGEGHVCLPLSQLRP
ESFFAGRHPELAQTLWHAAGAPEDWQSLLLAQTAVSNGQQATPLVVYRQRLYLHRMWQSE
GEVAQFIQRQHFSQSLEESRVRQTLDRYFGHQPDDWQKIAAAVALTRQVAVISGGPGTGK
TTTVAKLLASLIELSPTPPRIELTAPTGKAAARLTESLGNTLQQLHLADDILKSFPLEAT
TLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMVDLPMLANLIAALPVQARVVFLGDR
DQLASVEAGAVLGDICRCAEEGYSPQRAAELTRLTGCEVDGHEDASAPEVRDTICLLRRS
YRFAATSGIGQLALAVNAGAVKTSEQVLNSGFSDLRHRSLSSSDDYQQLLNDCAVGYRDY
LKLLADGAPPGEVLAAFGRFQLLCALREGPFGVAGLNDRIEQTLRQMGLIRRNITLNGKW
YVGRPVMIARNDRALGLFNGDIGIAMPDEEQQLKVWFPLPDGSIKAVQPSRLPPHDTAFA
MTVHKSQGSEFDHTLLVLPNKMMPVLTRELVYTAITRAKRQLTLYVENAVFISAVRMRTQ
RRSGLVERLHKETAAQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggcagaagccttacagctggcacagcaccagcgtttactgcgtcctctggac
gtgcagtttgcccgcatggtggcaaccgaagggcagcccgcgctgatgctggcagcggcg
ctggtcagccgggacgccggggaaggtcacgtttgtctgccgctgtcacagctgcgcccc
gaatctttttttgccgggcgtcatccggagctggcgcagacactgtggcatgctgcggga
gcgccggaggactggcagtcgttgctgctggcgcagacggcggtcagcaacggccagcag
gccacgccgctggtggtgtacaggcagcgtctttatctgcaccgaatgtggcagagcgaa
ggagaggttgcgcagtttatacagcgccagcacttttcccagagcctggaagagagccgg
gtgcgtcaaacgctggaccgttattttggtcatcagccggatgactggcagaagattgcg
gcggcagtggcgctgacgcgtcaggttgcggtgatctccggcgggccgggcaccggtaag
accacgacggtggccaagctgcttgccagtctgattgagctgtcgccgacccctccgcgt
atcgaactgacggcgcccaccggcaaggcggcggcgcgactgacggaatcgctgggcaat
acgttgcagcagctacatctggcagacgatattttgaaaagtttcccgctggaagccacc
acgctgcatcgcctgctgggggcgcagccgggcagtcagcgcatgcgctatcacgccgga
aatccgttgcacctggacgtgctggtggtggatgaagcctctatggtggatcttccgatg
ctggctaacctgattgccgcactacccgttcaggcgcgggtggtcttcctcggtgaccgc
gatcagctggcttcagtcgaggccggagccgtgcttggtgatatttgccgctgtgcggaa
gagggctacagcccgcagcgggccgcagagctgacgcgtttaaccggctgtgaggtggac
gggcacgaggatgccagcgcgcctgaagtgcgcgatacgatctgcctgctgcgcaggagc
taccgctttgccgctacgtccggtatcgggcagctggcgctggcggtcaatgcgggggcg
gtcaaaacgtcagagcaggtattaaacagtggtttcagcgacctccgacaccggtcgtta
agcagcagcgatgattatcagcagctgcttaacgactgcgcggtgggttaccgcgactac
ctgaagttgctggcggatggagccccgccgggtgaagtactggccgcgtttggccgcttt
cagctgctgtgcgcgctgcgcgaggggccgtttggcgtggcggggcttaacgaccgtatt
gagcagacgctacgccagatggggcttatccgacgcaatatcacgcttaacggcaaatgg
tacgttggacggccggtgatgattgcgcgtaatgaccgggcgcttgggctgtttaacggc
gatatcggcatagcgatgccggatgaagagcagcagctgaaggtctggttcccgttaccg
gatggcagcatcaaggcggtgcagcccagccgcctgccgccacatgacacggcttttgcc
atgacggtacacaagtcgcagggttcggagtttgaccatacgctgctggtgttaccgaat
aaaatgatgccggtattaacccgagaactggtgtataccgcaattacccgagccaaacgg
cagctgacgctttatgtcgagaacgcggtgtttatcagcgcggtgagaatgcgaacgcag
aggcgcagcgggttggtggagcggctacataaagagacggccgcccagtaa
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