Erwinia tasmaniensis: ETA_31380
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Entry
ETA_31380 CDS
T00711
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eta
Erwinia tasmaniensis
Pathway
eta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ETA_31380 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eta03021
]
ETA_31380 (rpoA)
03400 DNA repair and recombination proteins [BR:
eta03400
]
ETA_31380 (rpoA)
Enzymes [BR:
eta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ETA_31380 (rpoA)
Transcription machinery [BR:
eta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ETA_31380 (rpoA)
DNA repair and recombination proteins [BR:
eta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ETA_31380 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
CAO98184
UniProt:
B2VK71
LinkDB
All DBs
Position
complement(3519857..3520846)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHAICHLTDENAAISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccacgcctggtagatatcgaacaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctcggt
aacgcgctgcgccgtattctgctttcatcaatgccgggttgcgcggtgaccgaggttgaa
attgatggtgtactacatgagtacagcaccaaagagggcgtacaggaagatatcctggaa
atcctgctcaacctgaaaggtttagcggtaagagttcagggcaaagatgaagttattctt
actctgaataaatctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gttgaaatcgtcaagccgcagcacgcgatctgccatctgaccgatgaaaacgctgctatc
agcatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccaatcggtcgtctgttagtcgacgcctgctacagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtggaacagcgtaccgatttggacaag
ctggtcatcgaaatggaaaccaacggcactatcgatcctgaagaagcgatccgtcgtgcg
gctaccatcctggcagaacaactggaagctttcgtcgacttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatccgatcttgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgcttaaaacgcctaaccttggtaaaaaatctctt
actgagattaaagatgtgctggcttctcgtggtctgtctctgggcatgcgcctggaaaac
tggccgccagctagcattgctgatgaataa
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