Eleftheria terrae: N7L95_09440
Help
Entry
N7L95_09440 CDS
T09184
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
etb
Eleftheria terrae
Pathway
etb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7L95_09440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etb03019
]
N7L95_09440
03009 Ribosome biogenesis [BR:
etb03009
]
N7L95_09440
Enzymes [BR:
etb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
N7L95_09440
Messenger RNA biogenesis [BR:
etb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N7L95_09440
Ribosome biogenesis [BR:
etb03009
]
Prokaryotic type
rRNA processing factors
N7L95_09440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
WKB54576
LinkDB
All DBs
Position
2163997..2167053
Genome browser
AA seq
1018 aa
AA seq
DB search
MKRMLINATQPEERRLAIVDGQKLLDFETEIEGREQRKGNIYKAVVTRVEPSLEACFVDY
GEDRHGFLPFKEISRQFFKEGVDVRNAKISDAIREGQELLVQVEKEERGNKGAALTTFIS
LAGRYLVLMPNNPRGGGVSRRIEGEDREELKDALDQLNYPKGMSLIARTAGIGRSVDELQ
SDLNYMLKLWTAIDGAASARKGAFLIYQESSLVIRAIRDYFTADIGEILIDTDDIYDQAQ
QFMNHVMPDNAGRVKRYRDDAPLFSRFQIEHQIETAFARTVNLPSGGAIVIDHTEALVSI
DVNSARATRGGDIEETATRTNLEAADEIARQMRLRDLGGLIVVDFIDMEESKNRREVETR
LRDALRQDRARVQFSSISKFGLLELSRQRLRPALSEGSHITCPRCNGTGHIRDTESSALQ
ILRMVQEEAMKENTFAVHVQVPVEVTSFLLNEKRMEINKIEFKQSVKVLLVPNKHLETPN
YKLERLRHDDPRVENLQASYSMIEEPDDEVGITRREKSKPKQEPVIKGLLPEPPLQSTAP
ARAEPAPAPTPVAAATPPAPVPAPVPAPAPASGGFFGWLKKLFGAPEAPAPVPAPAPAPT
VAAPAPAVAKEGQDNRRRGDRGGERGERKDGDRRGGRDRAGREGGRDEAGREARRGEPRG
EGRTEGRGEGRGEGRGEGRGEGRDRNRDGQQRGRAGEQRVEALAGADAGAEAPRKERAPR
DGGRSGEPREAGAAQDGRPARGEGRRGPRPEREAGLPAEAPEAMEPHGFADTVPQEGTLE
GADEQQREGRRRRRGGRGRREREGAEGVDAVNAGEAGLDPVAGPEADAALASATEDTGSD
STAAPEGQPEEGTARDGEGRRRGRGRDRYRRERREQDGAEDAAVVVTEAQVVEGEPATVQ
DAALAVAAEPTGLPPAAAPVAAQPAPAPAPVAAPVQPFVLALDELQQVAAQAGLEWVHSD
ADKVRAVQDSLARQPQPVRVPRERKPVVAIDDGPLVLVETRTDLAELALPFETKAGPQ
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatgctgatcaatgcgacgcagcctgaagagcgtcgcctggccatcgtcgat
ggccagaaactgctcgacttcgagaccgaaatcgaaggccgcgagcagcgcaaaggcaac
atctacaaggcggtggtcacccgcgtcgagccgtccctggaagcctgcttcgtcgactac
ggcgaggaccgccacggcttcctgcccttcaaggaaatctcgcgccagttcttcaaggaa
ggcgtcgacgtccgcaacgccaagatctccgacgccatccgcgagggccaggaactgctg
gtgcaggtcgagaaggaagagcgcggcaacaagggcgcggccctcaccaccttcatctcg
ctggccggccgctacctggtgctgatgcccaacaacccgcgtggcggcggcgtctcgcgc
cgcatcgagggcgaggaccgcgaggaactgaaggacgcgctggaccagctcaactacccc
aagggcatgagcctgatcgcgcgcaccgccggcatcggccgcagcgtcgacgagctgcag
tccgacctcaactacatgctgaagctgtggaccgccatcgacggcgccgcttcggcacgc
aagggcgccttcctgatctaccaggaatcgtcgctggtgatccgcgcgatccgcgactac
ttcaccgccgacatcggcgaaatcctgatcgacaccgacgacatctacgatcaggcgcag
cagttcatgaaccacgtgatgccggacaacgccggccgcgtgaagcgctaccgcgatgac
gcgccgctgttcagccgcttccagatcgagcaccagatcgagaccgccttcgcccgcacg
gtgaacctgccgtccggcggcgcgatcgtgatcgaccacaccgaggcgctggtgtccatc
gacgtcaactccgcccgcgccacccgcggcggcgacatcgaggaaaccgccacccgcacc
aacctcgaagccgccgacgagattgcgcgccagatgcgcctgcgcgacctgggcggcctg
atcgtggtggacttcatcgacatggaagagtcgaagaaccgccgtgaagtggaaacccgg
ctgcgcgacgcgctgcgccaggaccgcgcccgggtgcagttcagctccatctccaagttc
ggcctgctggagctgtcgcgccagcgcctgcgcccggcgctgagcgaaggctcgcacatc
acctgcccgcgttgcaacggcaccggccacatccgcgacaccgagtccagcgcgctgcag
atcctgcgcatggtgcaagaggaggcgatgaaggaaaacaccttcgccgtccacgtgcag
gtgccggtggaggtgacctccttcctgctgaacgaaaagcggatggagatcaacaagatc
gaattcaagcagagcgtgaaggtgctgctggtgcccaacaagcacctggagacgcccaac
tacaagctcgaacgcctgcgccacgacgacccacgggtggagaacctgcaggccagctac
tcgatgatcgaggagcccgacgacgaggtcggcatcacgcgccgcgagaagagcaagccc
aagcaggagccggtcatcaagggcctgctgcccgagccgccgctgcagtccacggcgccc
gcccgcgccgagccggcgcccgcgcccaccccggtggccgccgccacgccgccggccccg
gtgcccgcgccggtgcccgcgcccgcgccggcgtcgggtggcttctttggctggctcaag
aagctgttcggcgctcccgaggcaccggcgccggtccctgcgccagcccccgcgccgacg
gtcgccgcaccggcaccggccgtggccaaggaaggccaggacaaccgtcgccgcggtgat
cgcggcggcgaacgcggcgagcgcaaggacggcgaccgccgcggcggccgcgaccgggct
ggccgagagggtggccgcgacgaagcgggccgcgaggcacgccgcggtgagccgcgcggt
gaaggccgcacggaaggccggggtgaaggtcgcggcgaaggccgtggcgagggtcgcggc
gaaggccgcgatcgcaaccgggacggccagcaacgcggccgcgccggcgagcagcgcgtc
gaggccctggccggtgcggacgccggtgccgaggcaccgcgcaaggaacgcgctccgcgc
gacggcggccgcagcggcgagccgcgcgaagccggcgccgcccaggacggccgtcccgcc
cgcggtgaaggtcgccggggcccgcgtcccgagcgtgaagccggcctgccggcggaagcg
cccgaagccatggaaccgcacggctttgccgacaccgtcccgcaggaaggcaccctcgag
ggcgcggacgagcaacaacgcgaaggccgtcgccgccgccgtggcggccgcgggcgccgg
gagcgcgaaggcgccgagggcgtcgacgccgtgaacgccggcgaagcgggtctggacccg
gtcgccgggccggaggccgacgcggccctggccagcgccaccgaggacaccggcagcgac
agcacggccgcccccgagggccagcccgaggaaggcaccgcccgtgatggcgaaggccgc
cgccgtggccggggccgtgaccgctatcgtcgtgagcgccgtgagcaagacggcgcggaa
gacgccgccgtggtcgtcaccgaagcccaggtggtcgaaggcgaacccgccaccgtgcag
gacgcggcgctggccgtcgccgccgagccgaccggcctgccgcccgccgcggcgcccgtg
gctgcccagcccgcacccgcgccggcgcctgtcgccgccccggtccagcccttcgtgctg
gccctggacgagttgcagcaggtggccgcccaggcaggcctggaatgggtgcattccgac
gccgacaaggtgcgtgccgtccaggacagcctggcacggcaaccgcagccggtgcgcgtc
ccgcgcgagcgcaagccggtggtggcgatcgacgacggcccgctggtgctcgtcgagacc
cgcaccgacctcgccgagctggccctgcccttcgagaccaaggccggcccgcagtga
DBGET
integrated database retrieval system
