Eleftheria terrae: N7L95_12390
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Entry
N7L95_12390 CDS
T09184
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
etb
Eleftheria terrae
Brite
KEGG Orthology (KO) [BR:
etb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etb03016
]
N7L95_12390
Enzymes [BR:
etb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
N7L95_12390
Transfer RNA biogenesis [BR:
etb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
N7L95_12390
Prokaryotic type
tRNA splicing ligases
N7L95_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WKB55147
LinkDB
All DBs
Position
2811295..2812497
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AA seq
400 aa
AA seq
DB search
MELMKNVQGWTEGVEVDHQALNQIRHIAGLPIVAGHVAIMPDVHLGKGATVGSVIPTRGA
IIPAAVGVDIGCGMCAVRTDLRAGDLPDSLAAIRSAIESLVPVGFAAHDKEVNPTHEAAH
GRVLKQRMDALYARFEKLSILSVLGALDARRIWKQIGTLGGGNHFIELCLDEAGAVWVML
HSGSRNIGKTIGEAAIGMAREACARAGVGLPDRDLAWLNEGSPEFHQYVQALQWAQDYAA
LNRDLMLFRVMRALRETLGREIGSTKEAINCHHNYATVEEHFGAKVWITRKGAVSAREGQ
LGIIPGSMGAKSYIVRGKGNPLSYCSCSHGAGRRHSRGMAKRLFDLDALAAQTAGVECRK
DEGVLDEIPGAYKDIDAVMAAQADLVSVEHTLKQVLCVKG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgaagaatgtccagggatggaccgaaggcgtcgaggtcgaccaccaggcg
ctcaaccagatccgccacatcgccggcctgcccatcgtggcgggtcatgtggccatcatg
cccgacgtgcacctgggcaagggcgcgacggtgggctccgtgattcccacccggggcgcc
atcattcccgcggccgtcggtgtcgacatcggctgcggcatgtgtgccgtgcgaaccgac
ctgcgggccggggatctgcccgacagcctggccgccattcgatcggcgatcgaatccttg
gtgccggtcgggttcgcggcgcacgacaaggaagtgaacccgacgcatgaagccgcccat
ggccgcgtgctgaagcagcgcatggacgcgctgtacgcccggttcgagaagctgtccatc
ctgtcggtgctcggtgccctcgacgcccgccgcatctggaagcagatcggcacgctgggc
ggcggcaaccacttcatcgaactgtgcctcgacgaggccggcgcggtgtgggtgatgctg
cactccggctcgcgcaatattggcaagacgatcggcgaagccgccatcggcatggcgcgc
gaagcgtgcgcccgggccggcgtgggcttgcccgaccgcgacctggcctggctgaacgaa
ggctcgcccgagttccaccagtatgtgcaggccttgcaatgggcgcaggactacgcggcg
ctcaaccgcgacctgatgctgttccgcgtgatgcgcgcactgcgcgagacactcgggcgc
gagatcggctccaccaaggaagccatcaactgccaccacaactacgcgacggtcgaagag
catttcggcgccaaggtgtggatcacccgcaagggcgcggtgagcgcgcgcgaaggccag
ctcgggatcattcccggctcgatgggcgccaagtcctacatcgtgcggggcaagggcaac
cccttgtcgtactgctcatgctcgcatggcgccggccggcgccactcgcgcggcatggca
aagcgcctgttcgacctcgacgcgctggcggcccagacggccggcgtggaatgccgcaag
gacgaaggcgtgctcgacgagattccgggcgcctacaaggacatcgatgccgtcatggcc
gcgcaggccgacctggtgagcgtggagcacacgctcaagcaggtcttgtgtgtgaaaggc
tga
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