Eleftheria terrae: N7L95_14405
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Entry
N7L95_14405 CDS
T09184
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
etb
Eleftheria terrae
Brite
KEGG Orthology (KO) [BR:
etb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etb03016
]
N7L95_14405
Enzymes [BR:
etb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
N7L95_14405
Transfer RNA biogenesis [BR:
etb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
N7L95_14405
Prokaryotic type
tRNA splicing ligases
N7L95_14405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF6511
Motif
Other DBs
NCBI-ProteinID:
WKB51001
LinkDB
All DBs
Position
complement(3253692..3254912)
Genome browser
AA seq
406 aa
AA seq
DB search
MTEQNYNIEDVAGGVPVKMWTRGVPVEDEAKRQLANAARLPVVFKHIAAMPDVHLGIGAT
VGSVIPTLKAIIPAAVGVDIGCGMIAAKTTLSASDLPDNLGPLRSAIERAVPHGRSPGAR
DPGAWHKVPGAVDTAWAQLEPEFTELCRDYPKLEKTNHRNHLGTLGTGNHFIEVCLDEEG
FVWFMLHSGSRGVGNAIGTMFIELAKQDAMRHQANLPDRDLAYFEEGSRYFGDYVRAVSW
AQKFAQLNREVMMRRVIEAAKTVIRKNFQSHIEAVNCHHNYVQKERHFNEDVYVTRKGAV
SAKKGELGIIPGSMGARSYIVRGKGNPESFESCSHGAGRTMSRGEAKRRYTLADHRAATE
GVECRKDKDVIDEIPMAYKDIDAVMEAQRDLVEVVHTLKQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacagaactacaacatcgaagacgtggccggtggcgtgccggtgaagatgtgg
acgcgcggcgtgccggtggaggacgaggcgaagcgccagctcgccaatgccgcccgcctg
ccggtggtgttcaagcacatcgcggccatgccggacgtgcacctgggcatcggcgcgacc
gtcggctcggtgatccccacgctgaaggccatcatccccgcggcggtcggcgtggacatc
ggctgcgggatgatcgcggccaagaccacgctgtcggcctcggacctgccggacaacctg
ggtccgctgcgctcggccatcgagcgtgcggtgccgcacggccgctcacccggtgcgcgc
gaccccggcgcctggcacaaggtgccgggcgcggtggacacggcctgggcgcagttggag
ccggagttcaccgagctgtgccgcgactacccgaagctggagaagaccaaccaccgcaac
cacctcggcacgctgggcaccggcaaccacttcatcgaggtctgcctggacgaggaaggc
ttcgtctggttcatgctgcactccggctcgcgtggcgtgggcaacgccatcggcacgatg
ttcatcgagctggccaagcaggacgccatgcgtcaccaggccaacctgccggaccgcgac
ctggcgtacttcgaggaaggctcccgctacttcggggactacgtgcgtgcggtgagctgg
gcccagaagttcgcacagctcaaccgcgaggtgatgatgcgccgcgtgatcgaggccgcg
aagaccgtgatccgcaagaacttccagagccacatcgaggcggtgaactgccaccacaac
tacgtgcagaaggagcgccacttcaacgaggacgtctacgtcacccgcaagggcgccgtg
agcgcgaagaagggcgagctgggcatcatccccggcagcatgggcgcgcgcagctacatc
gtgcgcggcaagggcaacccggagagcttcgagagctgctcgcacggcgctggccgcacg
atgagccgcggcgaggccaagcgccgctacaccctggccgaccatcgtgccgccaccgaa
ggtgtggagtgccgcaaggacaaggacgtgatcgacgagattccgatggcctacaaggac
atcgacgcggtcatggaagcccagcgcgacctggtggaggtggtgcacacgctgaagcag
gtggtgtgcgtgaagggctag
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