Eleftheria terrae: N7L95_24175
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Entry
N7L95_24175 CDS
T09184
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
etb
Eleftheria terrae
Pathway
etb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
etb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N7L95_24175 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etb03021
]
N7L95_24175 (rpoD)
Transcription machinery [BR:
etb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N7L95_24175 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WKB52834
LinkDB
All DBs
Position
complement(5379338..5381608)
Genome browser
AA seq
756 aa
AA seq
DB search
MTAKKSAPAPTTDAVQATEVEDKKKKVSKAAVKDDKAKATAKPARAAKAEGADDGKVKAK
RGRKPKSETTASPAKKEGFDADEDFSDVEADLEGEGAEAEVEAEVEEAAGGEDKPKAKPL
RMKVSRAKERALMREFGLDEAMLTDEEVAKRRSELKTLIKMGKTRGFLTHAEINDHMPEK
LVETEIMDAIVSMLNDMGIAVYEQAPDAATLLIAGGNTTTATEEEAEEEAEAALSTVDSE
FGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLQAMMLAISASPTTIAEILLLADK
IRAGEMQISEVVDGFVSEDEADDYVAEEDVDFFDEEDDDDGNGGSKALTKKLEELKNAAL
HKFDELSSHFDRMRKAYEKDGYKSPAYNRAQMSVSAEIMSIRFTVKIIEKLCGILRSQVD
DIRRYERELRKIVVDKCGMPQEHFIKTFPSNALNLQWAEKEVAAGKPYSNVMSRNLPAIQ
ELQQKLIDLQARAVVPIEDLKEINKKMNEGEKASRDAKKEMIEANLRLVISIAKKYTNRG
LQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIE
TINKMNRISRQHLQEFGYEPDAPTLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSH
LGDFIEDTNNTAPVEAAMQAGLRDVVKEILDSLTPREAKVLRMRFGIEMSTDHTLEEVGK
QFDVTRERIRQIEAKAIRKLKHPSRSDKLRTYLDNL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaagaaaagcgcccctgccccgaccaccgacgccgtgcaagccactgaagtc
gaagacaagaaaaagaaggtgagcaaggcggcggtgaaagacgacaaagccaaggcgacg
gccaagcccgcgcgcgcggccaaggccgaaggcgccgacgacggcaaggtgaaggccaag
cgcggtcgcaaaccgaagtccgagaccaccgcctcgcccgccaagaaggaaggcttcgac
gccgacgaggatttctcggacgtcgaggccgacctggaaggcgaaggcgctgaagccgag
gtcgaggcagaggtcgaggaagcagccggtggcgaggacaagcccaaggccaagccgctg
cggatgaaggtctcgcgcgccaaggagcgcgcgctgatgcgcgaattcggcctcgacgag
gcgatgctgaccgacgaggaagtcgccaagcgccgctcggagctgaagaccctcatcaag
atgggcaagacccgcggcttcctgacgcacgcggaaatcaacgaccacatgcccgagaag
ctggtcgagacggagatcatggacgccatcgtgtccatgctcaacgacatgggcatcgcg
gtctatgagcaggcgcccgacgccgccaccctgctgatcgccggcggcaacaccaccacc
gcgaccgaggaagaagccgaggaagaagccgaggcggccctgtcgacggtggactccgaa
ttcggccgcaccaccgacccggtgcgcatgtacatgcgtgagatggggacggtggaactg
ctcacgcgggaaggcgaaatcgagatcgccaagcgcatcgaaggcgggctgcaggccatg
atgctggccatctcggcttcgcccaccacgatcgccgagatcctgctgctggccgacaag
atccgcgccggcgagatgcagatctccgaggttgtggacggcttcgtctcggaagacgag
gccgacgattacgtggccgaggaagacgtcgacttcttcgacgaggaagacgacgacgac
ggcaatggcggctccaaggcgctgaccaagaagctggaagagctgaagaacgcggcgctg
cacaagttcgacgagctgtcctcgcacttcgaccgcatgcgcaaggcctacgagaaggac
ggctacaagtcgccggcctacaaccgggcccagatgtcggtcagcgccgagatcatgagc
atccgcttcacggtcaagatcatcgagaagctgtgcggcatcctgcgctcgcaggtggat
gacatccgtcgctacgagcgcgagctgcgcaagatcgtggtcgacaagtgcggcatgccg
caggagcacttcatcaagaccttcccgtccaatgcgctgaacctgcagtgggccgagaag
gaagtggcggctggcaagccctacagcaacgtgatgagccgcaacctgccggccatccag
gagctgcagcagaagctgatcgatctgcaggcccgggccgtagtgcccatcgaggacctg
aaggaaatcaacaagaagatgaacgagggcgagaaggcctctcgtgacgcgaagaaggag
atgatcgaggccaacctgcgcctggtgatctcgatcgcgaagaagtacaccaaccgcggc
ctgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaaggcggtggacaag
ttcgaatatcgccggggctacaagttctcgacctacgcgacgtggtggatccgccaggcc
atcacccgctcgatcgccgaccaggcccgcaccatccgcatcccggttcacatgatcgag
acgatcaacaagatgaaccgcatctcgcgccagcacctgcaggaattcggctacgagccg
gacgcgccgacgctggccgagaagatggagatgccggaagacaagatccgcaagatcatg
aagatcgccaaggagccgatctccatggaaacgccgatcggcgacgacgacgactcccac
ctgggcgacttcatcgaggacaccaacaacaccgcgccggtggaggccgccatgcaggcc
ggcctgcgcgacgtggtgaaggagatcctcgacagcctgaccccgcgcgaggccaaggtg
ctgcgcatgcgcttcggcatcgagatgtccaccgaccacacgctggaagaagtgggcaag
cagttcgacgtcacccgcgagcgcatccgccagatcgaggccaaggccatccgcaagctc
aagcatccgagccgctcggacaagctccgcacctacctcgacaatctgtaa
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