Eleftheria terrae: N7L95_25135
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Entry
N7L95_25135 CDS
T09184
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
etb
Eleftheria terrae
Pathway
etb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7L95_25135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etb03019
]
N7L95_25135
Enzymes [BR:
etb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N7L95_25135
Messenger RNA biogenesis [BR:
etb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N7L95_25135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
Utp25_C
DegT_DnrJ_EryC1
DEDD_Tnp_IS110
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WKB55369
LinkDB
All DBs
Position
unnamed1:165834..167399
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AA seq
521 aa
AA seq
DB search
MKFAELGLAEPILRAVQEQGYDTPTPIQLQAIPAVISGGDLLAGAQTGTGKTAGFTLPLL
HKLAATKVVRDARGRLPIRALILTPTRELAAQVEESVRTYGKYLPLKSMVMFGGVGMGPQ
VDALRRGVDILVATPGRLLDHHQQGTLDLSKVEYFVLDEADRMLDMGFIHDIKKVLAIVP
AQKQSLLFSATFSDEIKALAERLLNKPQVIEVARRNTTAETIAQKIHPVDRDSKKELLAH
LIKQNDWHQVLVFTRMKHGANRLVEFLQKEDITAMAIHGNKSQGARTRALAEFKTGELQV
LVATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEEGFLR
DIEKLIKRQIPREVVPGFEPDPNAKPEPIKLGRMTLHGGLGGSRSGGGGGGGGDRAGGGR
SGGRRPQAGGGQGQAPARAAQGGGQAHGGGNRAPAPARPQQHAPRSAAGGQGQPAGTPAR
PANAGASRSGQGGAGGQRSGTSSGKPAGQGAALLGGKPPRR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgctgaactcggcttggccgagcccatcttgcgcgccgtgcaggaacagggc
tacgacaccccgaccccgattcaactgcaggccattcccgctgtcatcagcggtggcgac
ctgctcgccggtgcccagaccggcaccggcaagaccgccggcttcacactgccgctgctg
cacaagctggcggccaccaaggtggtacgcgacgcacgcggccgcctgcccatccgtgcc
ctcatcctcacccccacccgcgagctggcggcgcaggtcgaggaaagcgtgcgcacctac
ggcaagtacctgccgctgaagtccatggtgatgttcggcggcgtcggcatgggcccgcag
gtcgacgcgctgcgccgcggcgtcgacatcctggtggccacccctggccgcctgctcgac
caccaccagcaaggcacgctggacctcagcaaggtcgagtacttcgtgctggacgaggcc
gaccgcatgctggacatgggcttcatccacgacatcaagaaggtgctggccatcgtgccg
gcgcagaagcagagcctgctgttctcggccaccttctcggacgagatcaaggccctggcc
gagcgcctgctgaacaagccacaggtcatcgaggtggcgcgccgcaacaccacggccgag
acgatcgcgcagaagatccacccggtggaccgcgacagcaagaaggaactgctggcccac
ctgatcaagcagaacgactggcaccaggtgctggtgttcacccgcatgaagcacggtgcc
aaccggctggtcgaattcctgcagaaggaagacatcaccgcgatggccatccacggcaac
aagagccagggtgcccgcacccgtgcgctggccgagttcaagaccggcgagctgcaggtg
ctggtggccaccgacatcgcggcgcgcggcattgacatcgaccagttgccgcacgtcgtg
aactacgagctgcccaacgtgccggaagactatgtgcaccgcatcggccgcaccggccgc
gccggcgcgcagggcgaggcgatctcgctggtgtgcgtcgacgaggaaggcttcctgcgc
gacatcgagaagctgatcaagcgccagatcccgcgtgaggtggtgcccggcttcgagccc
gacccgaatgccaagcccgagccgatcaagctcggccgcatgaccctgcatggcggcctc
ggcggcagccgcagcggcggcggcggcggtggtggtggcgaccgggctggcggcggccgc
tccggcggacggcgcccgcaagcgggcggtggccagggccaggctcctgcgcgtgccgcg
cagggtggcggccaggctcatggcggcggcaaccgggccccggcaccggcacgcccgcag
cagcacgcgccgcgttcggcagcaggcggccagggccagccggccggcaccccggcgcgg
ccggccaatgccggcgcgtctcgcagcggacaaggcggcgcggggggtcagcgcagcggc
acgtcctccggcaagcccgccgggcagggagctgccctgctcggcggcaagccgccgcgt
cgctga
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