Edwardsiella piscicida C07-087: ETAC_00460
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Entry
ETAC_00460 CDS
T02509
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
etc
Edwardsiella piscicida C07-087
Pathway
etc00300
Lysine biosynthesis
etc00470
D-Amino acid metabolism
etc01100
Metabolic pathways
etc01110
Biosynthesis of secondary metabolites
etc01120
Microbial metabolism in diverse environments
etc01230
Biosynthesis of amino acids
Module
etc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ETAC_00460 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ETAC_00460 (dapF)
Enzymes [BR:
etc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ETAC_00460 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGH72225
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Position
101230..102054
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AA seq
274 aa
AA seq
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MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQLLVVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRIKGLTNRRDIRVSTQNGRMTLHVGEDDRVTVNMGE
PQFEPGRIPFKAAKAEKTYILRVAQQTVLCGAVSMGNPHCVLQVEDVSRAQVELLGPVLE
SHERFPERVNVGFMQVVERDHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLDEQVQV
DLPGGTLHIRWPGPGTPLLMTGPAAHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgccaagatgcacgggctgggtaatgattttatggtggtggatgccgtcacc
cagaacgtttacttttcaccggagttgatccgccgcctggccgacaggcataccggcgtc
ggcttcgatcagctgttggtggtggaaccgccctacgatcccgatctggactttcactat
cgcatctttaacgccgacggcagcgaggttgcgcagtgcggcaatggcgcgcgctgcttt
gcccgttttgttcggatcaaggggctgaccaaccggcgcgatatccgcgtcagcacccag
aatggccgcatgacgctgcacgtaggcgaggacgatcgggtgacggtcaatatgggagag
ccgcagtttgagccggggcgtatccctttcaaagccgccaaggcggagaaaacctatatt
ctacgcgtggcgcagcagacggtgctgtgcggcgcggtctcgatgggaaaccctcactgt
gtcctgcaggttgaggacgtcagccgggctcaggttgagctgctgggaccggtgctggag
agccatgagcgctttcctgagcgggtaaacgttggctttatgcaggtggtcgagcgtgac
catatccggctacgggtatatgagcgcggcgccggcgagacgcaggcctgcggcagcggc
gcctgtgcggcggtcgccgtggggatccagcaggggctgctggatgagcaggtgcaggtg
gatctgcccggcggtactctgcacatccgttggccggggccgggaacgccgctgttgatg
accggacctgccgcccacgtctatgatggattcatccatttgtaa
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